Gene Pden_1904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPden_1904 
Symbol 
ID4581124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParacoccus denitrificans PD1222 
KingdomBacteria 
Replicon accessionNC_008686 
Strand
Start bp1903489 
End bp1904358 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content72% 
IMG OID639769224 
Productchromosome replication initiation inhibitor protein 
Protein accessionYP_915695 
Protein GI119384639 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID[TIGR03298] transcriptional regulator, ArgP family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.188746 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGACT ACGCCGCCCT CGCCGCCCTG TCCGAAATCA TCCGCCGCGG CAGTTTCGAG 
GCGGCGGCCG CGGCGCTCGG CGTCACCCCC TCGGCGGTGT CGCAACGCAT CAAGGGGCTG
GAGGAGCGGC TGGGCCAGGT GCTGATCCAT CGCGGCCCGC CCGCCAGCGG CACCGAGACC
GGGCTGCGGC TGATGCAGCA TCTCGACCAG GTGCGGCTGC TGGAAACCAC GCTCGCCGCC
AGCCTGCGCC CCACGGGCGG GCCGGCGGTG CTGCGGTTGG CGGTCAATGC CGACAGCCTG
GCGACCTGGT TCCCTCCGGT GATGACGGCG CTGCCGGTGC TCTACGACCT GGTGGTGGAC
GACCAGGACC ATGCCCGGGA CTGGCTGCGC CAAGGCCAGG TCTCGGCCGC GATCAGCTCG
GACCCAGACC CGGTGCCGGG CTGCGATGCG CTGCCGCTGG GCGCGATGCG CTATCTGGCG
CTGGCCACCC CGGATTTCCT CGCCCGGCAT TTCCCGGACG GCGTGACCGA AGCCGGCCTG
CGCGCCGCCC CTGCGATCAC CTTCAACGCC AAGGACGCGC TGCAATCCCG CTGGGCGCAA
AAGGCCACCG GCAGGCGCCT GCACCTGCCC GGCCACCTGA TCCCGGCCTC GGAACCCTTT
GCCCGCGCGG TCGAACTCGG TCTCGGCTGG GGCATGATCC CCGAGAGCAT AGCCGCCCCG
GCCCTGCACC AGGGCCGCCT GCAACCGCTG GTCCCCGACC TGCCGCTGGA CGTTGCGCTG
CATTGGCATG TGCAGCGCGC CATGGCCCCT GCCCTCGCCC CCCTGACCGC CGCCATAAGA
AAAAGGGCCG CAGCAGAACT GCGACCCTGA
 
Protein sequence
MLDYAALAAL SEIIRRGSFE AAAAALGVTP SAVSQRIKGL EERLGQVLIH RGPPASGTET 
GLRLMQHLDQ VRLLETTLAA SLRPTGGPAV LRLAVNADSL ATWFPPVMTA LPVLYDLVVD
DQDHARDWLR QGQVSAAISS DPDPVPGCDA LPLGAMRYLA LATPDFLARH FPDGVTEAGL
RAAPAITFNA KDALQSRWAQ KATGRRLHLP GHLIPASEPF ARAVELGLGW GMIPESIAAP
ALHQGRLQPL VPDLPLDVAL HWHVQRAMAP ALAPLTAAIR KRAAAELRP