| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SeD_A3404 |
|---|
| Symbol | |
|---|
| ID | 6871421 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011205 |
|---|
| Strand | + |
|---|
| Start bp | 3272677 |
|---|
| End bp | 3273570 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642786404 |
|---|
| Product | chromosome replication initiation inhibitor protein |
|---|
| Protein accession | YP_002217042 |
|---|
| Protein GI | 198245210 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR03298] transcriptional regulator, ArgP family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.269089 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 59 |
|---|
| Fosmid unclonability p-value | 0.216257 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGTC CGGACTACAG AACACTACAG GCGCTGGATG CCGTTATACG TGAACGAGGG
TTCGAGCGCG CCGCCCAGAA GCTGTGCATC ACGCAATCCG CCGTCTCACA GCGCATAAAA
CAGCTTGAGA ATATGTTCGG ACAACCTTTA TTGGTGCGTA CCGTTCCTCC TCGCCCTACG
GAGCAAGGGC AAAAATTACT GGCTCTGCTG CGTCAGGTTG AACTGCTGGA AGAAGAGTGG
CTGGGCGATG AACAAACCGG CTCTACACCG CTGCTGCTGT CGCTGGCGGT TAACGCCGAT
AGTCTGGCGA CCTGGCTGCT TCCGGCGCTG GCGCCGGTGC TGGCGGACTC CCCTATCCGT
CTCAATTTAC AGGTGGAAGA TGAAACGCGC ACGCAAGAAC GTCTGCGGCG CGGCGAGGTG
GTGGGCGCGG TGAGTATTCA GCATCAGGCG CTGCCCAGTT GCCTGGTAGA CAAACTGGGC
GCGCTCGACT ATCTGTTTGT CGCGTCAAGG CCGTTTGCCG AGCGCTATTT CCCCAATGGC
GTTACCCGGT CGTCGCTGCT GAAAGCGCCC GCCGTCGCGT TCGACCATCT GGATGATATG
CATCAGGCCT TTTTGCAACA GAATTTCGAT CTACCGCCCG GCAGCGTGCC GTGCCATATC
GTTAATTCAT CCGAAGCATT TGTACAGCTT GCGCGTCAGG GCACGACCTG CTGCATGATC
CCTCACCTGC AGATTGAGAA AGAGCTGGAA AGCGGCGAGT TGATCAACTT AACGCCTGGT
TTGCTGCAGC GCCGGATGCT TTACTGGCAC CGCTTTGCCC CGGAAAGCCG GATGATGCGC
AAAGTGACCG ACGCGCTGCT GGAGTACGGG CACAAGGTGC TGCGTCAGGA TTAG
|
|---|
| Protein sequence | MKRPDYRTLQ ALDAVIRERG FERAAQKLCI TQSAVSQRIK QLENMFGQPL LVRTVPPRPT
EQGQKLLALL RQVELLEEEW LGDEQTGSTP LLLSLAVNAD SLATWLLPAL APVLADSPIR
LNLQVEDETR TQERLRRGEV VGAVSIQHQA LPSCLVDKLG ALDYLFVASR PFAERYFPNG
VTRSSLLKAP AVAFDHLDDM HQAFLQQNFD LPPGSVPCHI VNSSEAFVQL ARQGTTCCMI
PHLQIEKELE SGELINLTPG LLQRRMLYWH RFAPESRMMR KVTDALLEYG HKVLRQD
|
|---|
| |