23 homologs were found in PanDaTox collection
for query gene HS_0535 on replicon NC_008309
Organism: Haemophilus somnus 129PT



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008309  HS_0535  transcriptional regulator  100 
 
 		 131 aa  269  1e-71  Haemophilus somnus 129PT  Bacteria  hitchhiker  0.00965435  n/a   
 
 
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NC_010159  YpAngola_A4149  helix-turn-helix DNA binding domain-containing protein  47.69 
 
 		 120 aa  125  2.0000000000000002e-28  Yersinia pestis Angola  Bacteria  decreased coverage  0.00609324  hitchhiker  0.00863395 
 
 
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NC_010159  YpAngola_A3858  helix-turn-helix DNA binding domain-containing protein  46.92 
 
 		 120 aa  125  2.0000000000000002e-28  Yersinia pestis Angola  Bacteria  normal  0.793488  normal  0.0443892 
 
 
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NC_013421  Pecwa_0405  transcriptional regulator, XRE family  43.75 
 
 		 123 aa  124  6e-28  Pectobacterium wasabiae WPP163  Bacteria  normal  0.267838  n/a   
 
 
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NC_009708  YpsIP31758_0887  helix-turn-helix DNA binding domain-containing protein  45.38 
 
 		 120 aa  123  9e-28  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  1  n/a   
 
 
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NC_010465  YPK_1221  XRE family transcriptional regulator  46.09 
 
 		 119 aa  115  1.9999999999999998e-25  Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
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NC_009436  Ent638_1132  XRE family transcriptional regulator  43.41 
 
 		 157 aa  107  5e-23  Enterobacter sp. 638  Bacteria  normal  1  normal  1 
 
 
-
 
NC_002967  TDE1647  DNA-binding protein  33.9 
 
 		 115 aa  63.5  0.0000000009  Treponema denticola ATCC 35405  Bacteria  normal  0.68181  n/a   
 
 
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NC_011769  DvMF_1635  transcriptional regulator, XRE family  31.75 
 
 		 112 aa  58.2  0.00000003  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  1 
 
 
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NC_010513  Xfasm12_0666  XRE family transcriptional regulator  25.95 
 
 		 114 aa  52.8  0.000002  Xylella fastidiosa M12  Bacteria  normal  1  n/a   
 
 
-
 
NC_011894  Mnod_5702  transcriptional regulator, XRE family  31.97 
 
 		 124 aa  47  0.0001  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_011060  Ppha_0593  transcriptional regulator, XRE family  38.6 
 
 		 108 aa  43.9  0.0008  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  0.0244812  n/a   
 
 
-
 
NC_007643  Rru_A3411  XRE family transcriptional regulator  29.41 
 
 		 97 aa  43.5  0.001  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  1  n/a   
 
 
-
 
NC_007644  Moth_1714  XRE family transcriptional regulator  40.82 
 
 		 67 aa  42.7  0.002  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.0000000000253714  normal  1 
 
 
-
 
NC_007498  Pcar_1786  helix-turn-helix transcriptional regulator  26.27 
 
 		 124 aa  42.7  0.002  Pelobacter carbinolicus DSM 2380  Bacteria  normal  1  n/a   
 
 
-
 
NC_011060  Ppha_0601  transcriptional regulator, XRE family  29.47 
 
 		 108 aa  42.4  0.002  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009668  Oant_3268  XRE family transcriptional regulator  34.62 
 
 		 91 aa  41.6  0.004  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  1  n/a   
 
 
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NC_007484  Noc_2542  XRE family transcriptional regulator  25.86 
 
 		 165 aa  40.8  0.007  Nitrosococcus oceani ATCC 19707  Bacteria  normal  1  n/a   
 
 
-
 
NC_003295  RSc3278  hypothetical protein  27.5 
 
 		 110 aa  40.4  0.008  Ralstonia solanacearum GMI1000  Bacteria  normal  0.397996  normal  1 
 
 
-
 
NC_009485  BBta_6629  putative Phage-related transcriptional regulator  38.18 
 
 		 143 aa  40.4  0.008  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  0.275503 
 
 
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NC_007644  Moth_1827  XRE family transcriptional regulator  31.51 
 
 		 252 aa  40.4  0.008  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0400601  normal  1 
 
 
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NC_011060  Ppha_1724  transcriptional regulator, XRE family  38.6 
 
 		 108 aa  40.4  0.009  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010725  Mpop_4742  transcriptional regulator, XRE family  27.19 
 
 		 124 aa  40  0.01  Methylobacterium populi BJ001  Bacteria  normal  1  normal  0.0122495 
 
 
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