Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A3858 |
Symbol | |
ID | 5802336 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 4092685 |
End bp | 4093047 |
Gene Length | 363 bp |
Protein Length | 120 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641341652 |
Product | helix-turn-helix DNA binding domain-containing protein |
Protein accession | YP_001608162 |
Protein GI | 162419313 |
COG category | [R] General function prediction only |
COG ID | [COG2522] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.793488 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.0443892 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAAC TACAATACAT TCATGATGAA GCAGGAAAGC CTCAGTTTGT GGTTTTACCC GTTGCCGAAT ACCAGCAGCT TATCTCTAAT GCAAAGTATG AGGATATTCC CTATGTTGCT GATAACGATG ATGATCAGAC GATCCCGAAT GAAGTTGTTC AAATCATGGT AAACGATGGT GTCAGTTTGC TGGCTGCATG GCGTATCTAC CGTGGTTTTT CGCAATATGA AATAGCAGAA CTGCTTGGCA CCACCCAATC TGCTGTATCC CAATGGGAAG CCGTAGATTC TCGCCCACAG AAGAAAACCA GAGAGAAATT AGCAGCAATT TATAAATGCC GGGCGGCGCA GATGATTTTG TGA
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Protein sequence | MAKLQYIHDE AGKPQFVVLP VAEYQQLISN AKYEDIPYVA DNDDDQTIPN EVVQIMVNDG VSLLAAWRIY RGFSQYEIAE LLGTTQSAVS QWEAVDSRPQ KKTREKLAAI YKCRAAQMIL
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