15 homologs were found in PanDaTox collection
for query gene Xfasm12_0666 on replicon NC_010513
Organism: Xylella fastidiosa M12



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010513  Xfasm12_0666  XRE family transcriptional regulator  100 
 
 		 114 aa  234  3e-61  Xylella fastidiosa M12  Bacteria  normal  1  n/a   
 
 
-
 
NC_003295  RSc3278  hypothetical protein  47.66 
 
 		 110 aa  95.1  3e-19  Ralstonia solanacearum GMI1000  Bacteria  normal  0.397996  normal  1 
 
 
-
 
NC_007510  Bcep18194_A3331  XRE family transcriptional regulator  47.66 
 
 		 109 aa  92  3e-18  Burkholderia sp. 383  Bacteria  normal  0.925348  normal  0.648001 
 
 
-
 
NC_002967  TDE1647  DNA-binding protein  42.11 
 
 		 115 aa  84.7  4e-16  Treponema denticola ATCC 35405  Bacteria  normal  0.68181  n/a   
 
 
-
 
NC_011769  DvMF_1635  transcriptional regulator, XRE family  41.51 
 
 		 112 aa  79.3  0.00000000000001  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  1 
 
 
-
 
NC_010465  YPK_1221  XRE family transcriptional regulator  32.76 
 
 		 119 aa  74.7  0.0000000000004  Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
-
 
NC_007974  Rmet_5722  putative transcriptional regulator  41.35 
 
 		 141 aa  72.8  0.000000000002  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013421  Pecwa_0405  transcriptional regulator, XRE family  35 
 
 		 123 aa  65.5  0.0000000002  Pectobacterium wasabiae WPP163  Bacteria  normal  0.267838  n/a   
 
 
-
 
NC_009436  Ent638_1132  XRE family transcriptional regulator  33.6 
 
 		 157 aa  65.1  0.0000000003  Enterobacter sp. 638  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009708  YpsIP31758_0887  helix-turn-helix DNA binding domain-containing protein  32.17 
 
 		 120 aa  59.7  0.00000001  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  1  n/a   
 
 
-
 
NC_010159  YpAngola_A4149  helix-turn-helix DNA binding domain-containing protein  31.3 
 
 		 120 aa  58.9  0.00000002  Yersinia pestis Angola  Bacteria  decreased coverage  0.00609324  hitchhiker  0.00863395 
 
 
-
 
NC_010159  YpAngola_A3858  helix-turn-helix DNA binding domain-containing protein  32.17 
 
 		 120 aa  58.5  0.00000003  Yersinia pestis Angola  Bacteria  normal  0.793488  normal  0.0443892 
 
 
-
 
NC_008309  HS_0535  transcriptional regulator  25.95 
 
 		 131 aa  52.8  0.000002  Haemophilus somnus 129PT  Bacteria  hitchhiker  0.00965435  n/a   
 
 
-
 
NC_007498  Pcar_1786  helix-turn-helix transcriptional regulator  28.85 
 
 		 124 aa  45.4  0.0003  Pelobacter carbinolicus DSM 2380  Bacteria  normal  1  n/a   
 
 
-
 
NC_007434  BURPS1710b_1676  gp68  33.33 
 
 		 155 aa  41.2  0.005  Burkholderia pseudomallei 1710b  Bacteria  normal  0.610076  n/a   
 
 
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