15 homologs were found in PanDaTox collection
for query gene Rmet_5722 on replicon NC_007974
Organism: Cupriavidus metallidurans CH34



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_007974  Rmet_5722  putative transcriptional regulator  100 
 
 		 141 aa  291  3e-78  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  1 
 
 
-
 
NC_003295  RSc3278  hypothetical protein  46.67 
 
 		 110 aa  90.5  7e-18  Ralstonia solanacearum GMI1000  Bacteria  normal  0.397996  normal  1 
 
 
-
 
NC_007510  Bcep18194_A3331  XRE family transcriptional regulator  44.55 
 
 		 109 aa  82.8  0.000000000000001  Burkholderia sp. 383  Bacteria  normal  0.925348  normal  0.648001 
 
 
-
 
NC_011769  DvMF_1635  transcriptional regulator, XRE family  45 
 
 		 112 aa  75.9  0.0000000000002  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  1 
 
 
-
 
NC_010513  Xfasm12_0666  XRE family transcriptional regulator  41.35 
 
 		 114 aa  72.8  0.000000000002  Xylella fastidiosa M12  Bacteria  normal  1  n/a   
 
 
-
 
NC_002967  TDE1647  DNA-binding protein  31.48 
 
 		 115 aa  69.7  0.00000000001  Treponema denticola ATCC 35405  Bacteria  normal  0.68181  n/a   
 
 
-
 
NC_010465  YPK_1221  XRE family transcriptional regulator  27.83 
 
 		 119 aa  47.8  0.00005  Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
-
 
NC_007498  Pcar_1786  helix-turn-helix transcriptional regulator  30.91 
 
 		 124 aa  41.6  0.003  Pelobacter carbinolicus DSM 2380  Bacteria  normal  1  n/a   
 
 
-
 
NC_009441  Fjoh_0465  XRE family transcriptional regulator  33.33 
 
 		 138 aa  40.4  0.008  Flavobacterium johnsoniae UW101  Bacteria  normal  1  n/a   
 
 
-
 
NC_009708  YpsIP31758_0887  helix-turn-helix DNA binding domain-containing protein  28.3 
 
 		 120 aa  40.4  0.008  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  1  n/a   
 
 
-
 
NC_010159  YpAngola_A3858  helix-turn-helix DNA binding domain-containing protein  28.57 
 
 		 120 aa  40.4  0.008  Yersinia pestis Angola  Bacteria  normal  0.793488  normal  0.0443892 
 
 
-
 
NC_010623  Bphy_5530  XRE family transcriptional regulator  50 
 
 		 162 aa  40.4  0.008  Burkholderia phymatum STM815  Bacteria  normal  1  normal  0.0171722 
 
 
-
 
NC_011060  Ppha_0986  transcriptional regulator, XRE family  30.43 
 
 		 130 aa  40.4  0.008  Pelodictyon phaeoclathratiforme BU-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008061  Bcen_3970  XRE family transcriptional regulator  47.92 
 
 		 135 aa  40  0.01  Burkholderia cenocepacia AU 1054  Bacteria  normal  1  n/a   
 
 
-
 
NC_008543  Bcen2424_4397  XRE family transcriptional regulator  47.92 
 
 		 135 aa  40  0.01  Burkholderia cenocepacia HI2424  Bacteria  normal  1  normal  0.78876 
 
 
-
 
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