Gene Ppha_1724 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpha_1724 
Symbol 
ID6462975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelodictyon phaeoclathratiforme BU-1 
KingdomBacteria 
Replicon accessionNC_011060 
Strand
Start bp1832351 
End bp1832677 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content50% 
IMG OID642727939 
Producttranscriptional regulator, XRE family 
Protein accessionYP_002018576 
Protein GI194336782 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGATC TCAAATACCA GCCTGTGGAG CACAATCACG AAGAATTTCT CCGCAAGGCA 
ATGGTAAATA AAGAATTTAA AGCGGGGTAT GAGGCTCTTG GACCGAAGTA TGCCCTGATA
CGGGAACTCC TTGCCGCCCG CCAGCGCTCA GGCATGACGC AAGAAGCTGT TGCTCTGAAA
ATAGGCACGT CAAAAAGTGC CATCTCCAGA CTGGAATCCG GCAGCAAGCA TACCCCCTCT
GTTGCCACGC TGAGGAAATA CGCCGATGCA GTTGGCTGCG AACTGGAAAT CAAACTGATC
AAAAAAAAGG AACCGCAAAA GATCTGA
 
Protein sequence
MDDLKYQPVE HNHEEFLRKA MVNKEFKAGY EALGPKYALI RELLAARQRS GMTQEAVALK 
IGTSKSAISR LESGSKHTPS VATLRKYADA VGCELEIKLI KKKEPQKI