60 homologs were found in PanDaTox collection
for query gene Dtox_4327 on replicon NC_013216
Organism: Desulfotomaculum acetoxidans DSM 771



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013216  Dtox_4327  transcriptional regulator, PadR-like family  100 
 
 
117 aa  243  4.9999999999999997e-64  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_007355  Mbar_A0520  PadR family transcriptional regulator  57.94 
 
 
111 aa  141  3e-33  Methanosarcina barkeri str. Fusaro  Archaea  normal  normal 
 
 
-
 
NC_010814  Glov_0133  transcriptional regulator, PadR-like family  46.02 
 
 
114 aa  110  8.000000000000001e-24  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_0849  PadR-like family transcriptional regulator  47.06 
 
 
113 aa  99.4  1e-20  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS0891  PadR family transcriptional regulator  48.04 
 
 
113 aa  99  2e-20  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0947  PadR family transcriptional regulator  48.04 
 
 
113 aa  99  2e-20  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.720575  n/a   
 
 
-
 
NC_006274  BCZK0845  transcriptional regulator  47.06 
 
 
113 aa  98.2  3e-20  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_1031  transcriptional regulator, PadR family  47.06 
 
 
113 aa  97.4  5e-20  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  1.97206e-22 
 
 
-
 
NC_005957  BT9727_0857  PadR family transcriptional regulator  47.06 
 
 
113 aa  97.1  8e-20  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0432305  n/a   
 
 
-
 
NC_011658  BCAH187_A1118  transcriptional regulator, PadR family  46.08 
 
 
113 aa  95.1  3e-19  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_0364  transcriptional regulator, PadR-like family  43.75 
 
 
123 aa  85.5  2e-16  Anaeromyxobacter sp. K  Bacteria  normal  0.7806  n/a   
 
 
-
 
NC_007644  Moth_2210  PadR family transcriptional regulator  42.65 
 
 
136 aa  68.2  0.00000000004  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.0000983736  normal  0.0100315 
 
 
-
 
NC_013385  Adeg_1121  transcriptional regulator, PadR-like family  44.78 
 
 
129 aa  66.6  0.0000000001  Ammonifex degensii KC4  Bacteria  hitchhiker  0.000122824  n/a   
 
 
-
 
NC_013216  Dtox_0980  transcriptional regulator, PadR-like family  34.29 
 
 
127 aa  60.1  0.00000001  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.000000128414  normal  0.0555897 
 
 
-
 
NC_003909  BCE_1427  PadR family transcriptional regulator  37.23 
 
 
150 aa  57.4  0.00000007  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_009674  Bcer98_1041  PadR-like family transcriptional regulator  37.23 
 
 
150 aa  57.4  0.00000007  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.812068  n/a   
 
 
-
 
NC_007530  GBAA_1328  PadR family transcriptional regulator  36.17 
 
 
150 aa  56.6  0.0000001  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B3978  transcriptional regulator, PadR family  36.17 
 
 
150 aa  56.2  0.0000001  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011725  BCB4264_A1366  transcriptional regulator, PadR family  36.17 
 
 
150 aa  56.2  0.0000001  Bacillus cereus B4264  Bacteria  normal  0.261083  n/a   
 
 
-
 
NC_008554  Sfum_0276  PadR-like family transcriptional regulator  38.14 
 
 
138 aa  56.2  0.0000001  Syntrophobacter fumaroxidans MPOB  Bacteria  decreased coverage  0.00724542  normal 
 
 
-
 
NC_006274  BCZK1207  PadR family transcriptional regulator putative  36.17 
 
 
150 aa  56.6  0.0000001  Bacillus cereus E33L  Bacteria  normal  0.0174936  n/a   
 
 
-
 
NC_011658  BCAH187_A1468  transcriptional regulator, PadR family  36.17 
 
 
150 aa  56.6  0.0000001  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_1403  transcriptional regulator, PadR family  36.17 
 
 
150 aa  56.6  0.0000001  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_005957  BT9727_1205  PadR family transcriptional regulator putative  36.17 
 
 
150 aa  56.6  0.0000001  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_005945  BAS1228  PadR family transcriptional regulator  36.17 
 
 
150 aa  56.6  0.0000001  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_010424  Daud_0311  PadR-like family transcriptional regulator  30.93 
 
 
138 aa  56.6  0.0000001  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_1228  PadR-like family transcriptional regulator  37.63 
 
 
120 aa  55.5  0.0000002  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1229  PadR-like family transcriptional regulator  36.17 
 
 
150 aa  56.2  0.0000002  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A4316  transcriptional regulator, PadR family  34.83 
 
 
105 aa  53.5  0.0000008  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011772  BCG9842_B0918  transcriptional regulator, PadR family  33.71 
 
 
105 aa  53.1  0.000001  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_011658  BCAH187_A4335  transcriptional regulator, PadR family  33.71 
 
 
105 aa  53.1  0.000001  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_4059  PadR-like family transcriptional regulator  33.71 
 
 
105 aa  53.5  0.000001  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK3958  PadR family transcriptional regulator  33.71 
 
 
111 aa  52.8  0.000001  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_4279  transcriptional regulator  33.71 
 
 
105 aa  53.1  0.000001  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_2392  PadR family transcriptional regulator  33.68 
 
 
149 aa  52.8  0.000001  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.0642121  n/a   
 
 
-
 
NC_011661  Dtur_0170  transcriptional regulator, PadR-like family  33.67 
 
 
121 aa  52  0.000003  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_3947  PadR family transcriptional regulator  32.58 
 
 
105 aa  50.4  0.000008  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_0529  transcriptional regulator, PadR-like family  36.36 
 
 
127 aa  49.7  0.00001  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_1843  PadR-like family transcriptional regulator  34.04 
 
 
117 aa  47.8  0.00005  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_1119  transcriptional regulator, PadR-like family  30.26 
 
 
123 aa  46.2  0.0002  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.0000828793  n/a   
 
 
-
 
NC_007498  Pcar_0584  putative transcriptional regulator, PhaQ-like  29.47 
 
 
136 aa  44.7  0.0004  Pelobacter carbinolicus DSM 2380  Bacteria  unclonable  3.02813e-22  n/a   
 
 
-
 
NC_009712  Mboo_0346  PadR-like family transcriptional regulator  29.49 
 
 
108 aa  43.5  0.001  Candidatus Methanoregula boonei 6A8  Archaea  normal  normal 
 
 
-
 
NC_003909  BCE_4828  30S ribosomal protein S14 homolog-related  28.75 
 
 
114 aa  43.1  0.001  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_002976  SERP1934  PadR family transcriptional regulator  21.98 
 
 
106 aa  42.4  0.002  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_013204  Elen_0592  transcriptional regulator, PadR-like family  36.07 
 
 
137 aa  42  0.002  Eggerthella lenta DSM 2243  Bacteria  normal  0.592767  normal  0.718334 
 
 
-
 
NC_010184  BcerKBAB4_4516  PadR-like family transcriptional regulator  28.21 
 
 
114 aa  42  0.003  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_4418  PadR family transcriptional regulator  28.75 
 
 
114 aa  42  0.003  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_3375  transcriptional regulator, PadR-like family  28.87 
 
 
114 aa  41.6  0.003  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.000000000695283  n/a   
 
 
-
 
NC_011898  Ccel_2935  transcriptional regulator, PadR-like family  29.27 
 
 
116 aa  41.6  0.003  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.000047727  n/a   
 
 
-
 
NC_012669  Bcav_3065  transcriptional regulator, PadR-like family  28.57 
 
 
136 aa  42  0.003  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.599102  normal  0.802869 
 
 
-
 
NC_011725  BCB4264_A4136  transcriptional regulator, PadR family  27.78 
 
 
110 aa  41.6  0.004  Bacillus cereus B4264  Bacteria  normal  0.345707  n/a   
 
 
-
 
NC_011772  BCG9842_B1102  transcriptional regulator, PadR family  27.78 
 
 
110 aa  41.2  0.005  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_009718  Fnod_1448  PadR-like family transcriptional regulator  30.53 
 
 
124 aa  41.2  0.005  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_008531  LEUM_2026  PadR family transcriptional regulator  29.35 
 
 
102 aa  41.2  0.005  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  unclonable  0.000000771993  n/a   
 
 
-
 
NC_009674  Bcer98_2728  PadR-like family transcriptional regulator  26.67 
 
 
110 aa  40.8  0.006  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.323988  n/a   
 
 
-
 
NC_014158  Tpau_0474  transcriptional regulator, PadR-like family  36.73 
 
 
113 aa  40.4  0.007  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_3814  transcriptional regulator, PadR-like family  25.53 
 
 
106 aa  40.8  0.007  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.375382  normal  0.563614 
 
 
-
 
NC_006274  BCZK4436  PadR family transcriptional regulator  28.21 
 
 
122 aa  40.8  0.007  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_013926  Aboo_1141  transcriptional regulator, PadR-like family  32.18 
 
 
151 aa  40.4  0.009  Aciduliprofundum boonei T469  Archaea  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_3858  PadR-like family transcriptional regulator  26.67 
 
 
110 aa  40  0.01  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
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