Gene Mboo_0346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0346 
Symbol 
ID5411113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp337653 
End bp337979 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content52% 
IMG OID640867561 
ProductPadR-like family transcriptional regulator 
Protein accessionYP_001403510 
Protein GI154149892 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATCC AGTTCAAAAA AGGAGTGCTC GGGATCTGCG TGCTCTGTGT GCTTGCAAAA 
AAAGACTGTT ACGGGTACGA GCTCGTGGAC GAGATCTCAA AAAAGATCGA CATCGCAGAA
GGCACCATCT ACCCGCTGCT CCACCGCCTG AAAGATGAAG GCCTGGTAAC CACCTACCTG
CAGGAATCCG GTGAAGGCCC CCCACGGAAA TATTACCGGC TGACCGACGC GGGAAGGACA
AAAGAACACG AACAGCGCGA TGAATGGGTC CACTTTGCTG AATCCGTCAA TGCGCTCCTT
GAGGAGAGAT CACATGGTGA CAACTGA
 
Protein sequence
MNIQFKKGVL GICVLCVLAK KDCYGYELVD EISKKIDIAE GTIYPLLHRL KDEGLVTTYL 
QESGEGPPRK YYRLTDAGRT KEHEQRDEWV HFAESVNALL EERSHGDN