Gene Rxyl_2392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_2392 
Symbol 
ID4115638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand- 
Start bp2403489 
End bp2403938 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content66% 
IMG OID638037172 
ProductPadR family transcriptional regulator 
Protein accessionYP_645132 
Protein GI108805195 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID[TIGR02719] poly-beta-hydroxybutyrate-responsive repressor 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0642121 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGAGA GATCCATGAA CGACGAGCAC AGGGAGCACC GGGGCTCCGG TCCTGAGGGG 
AAGGAGTTTC GGGGGGTCGA GGCCCGGCCC AGGAACTGGC TGGTGCCGGT GATCCTGCTG 
TCGCTCCGGG ACTGGAACTC CTACGGCTAC GAGCTGATGG AGCGTGCGGC GAAGTTCGGC 
TTTGAGGCCA TGAACCCCGG CACGCTCTAC CGGACGCTGC GGCAGATGGA GAAGGACGGT 
ATCGTCAAGT CCACCTGGGA GACCTCCAAG GGGGGGCCTG CCCGGAGGAT GTACTCCATA 
ACCGACGCGG GCAGGGCCTA CCTGGACTTC TGGGCCAAGT CGCTGGAGCA GTACCAGCAG 
ATGATGGACA CCTTCTTCAG GATGTACACC GGCCGCCCGA TGCGGGACGA GCCCGACGAG 
GAGGGGCGCG GCGGCCGGGA GGAGCGTTAG
 
Protein sequence
MEERSMNDEH REHRGSGPEG KEFRGVEARP RNWLVPVILL SLRDWNSYGY ELMERAAKFG 
FEAMNPGTLY RTLRQMEKDG IVKSTWETSK GGPARRMYSI TDAGRAYLDF WAKSLEQYQQ 
MMDTFFRMYT GRPMRDEPDE EGRGGREER