| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Adeg_1121 |
|---|
| Symbol | |
|---|
| ID | 8491109 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ammonifex degensii KC4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013385 |
|---|
| Strand | + |
|---|
| Start bp | 1132828 |
|---|
| End bp | 1133217 |
|---|
| Gene Length | 390 bp |
|---|
| Protein Length | 129 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 646359133 |
|---|
| Product | transcriptional regulator, PadR-like family |
|---|
| Protein accession | YP_003239092 |
|---|
| Protein GI | 260892995 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1695] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | [TIGR02719] poly-beta-hydroxybutyrate-responsive repressor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.000122824 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGCCAGA GCCACGGTCA CGGCCACCGC CACGGGAGTT GCCGGTGCGC CGCTTCCATA
GAGCGCTTTA TGCAGCCATG CCTCTTGCTG CTCCTGCGCC GGCGGCCTAC TCACGGCTAC
GAGCTCATGC GCTACTTAGA GGAGTTTGGC TTCAGCGGCG AGGACCTCGA CCCAGGAACC
GTCTACCGCA ACCTGCGCCG CCTGGAGGAA GAGGGTCTGG TTTCCTCCCG CTGGGACACC
AGCGGCGGGG GCCCGGCCCG GCGCCTCTAC CGCCTCACTC CCGAGGGGGA AGAGATGCTG
GCGGCCTGGG TGGAGGTCAT AAAACGCCAG AAGAGCCGCC TGGAGCTTTT CCTGCAGAAA
TATCAGGAGG AGTTCGGTAG GCTAGAATGA
|
|---|
| Protein sequence | MCQSHGHGHR HGSCRCAASI ERFMQPCLLL LLRRRPTHGY ELMRYLEEFG FSGEDLDPGT
VYRNLRRLEE EGLVSSRWDT SGGGPARRLY RLTPEGEEML AAWVEVIKRQ KSRLELFLQK
YQEEFGRLE
|
|---|
| |