Gene Mbar_A0520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMbar_A0520 
Symbol 
ID3624260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanosarcina barkeri str. Fusaro 
KingdomArchaea 
Replicon accessionNC_007355 
Strand
Start bp623082 
End bp623417 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content41% 
IMG OID637699412 
ProductPadR family transcriptional regulator 
Protein accessionYP_304081 
Protein GI73668066 
COG category[K] Transcription 
COG ID[COG1695] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAGAA ACACATACTT TCGTCATACA CCTTCATTTA TACTGCTCTT TCTGGCACAG 
AAATCCGCAT ATGGAGCCCT TTTATTCAAG AGACTTGACA AAGAAATGCC TTTCAATCTG
ATAGATACTC CTGCGCTCTA CAGAGCACTT AACGATCTGG AAAAAGAGGG AGCAGTTGAA
GCATACTGGG ACACTTCCGA ACCAGGCCCA GCAAAAAAAT GGTATAAGAT AACCCAAAAA
GGAATCGAAA AGCTGGGTGA ACTCAAGCAG GATATTGAAA GGAGAAAAAA GGACCTGGAT
TTTTTCCTGG AGACTTACGA AAAGTTACAA AACTGA
 
Protein sequence
MPRNTYFRHT PSFILLFLAQ KSAYGALLFK RLDKEMPFNL IDTPALYRAL NDLEKEGAVE 
AYWDTSEPGP AKKWYKITQK GIEKLGELKQ DIERRKKDLD FFLETYEKLQ N