More than 300 homologs were found in PanDaTox collection
for query gene Dole_0107 on replicon NC_009943
Organism: Desulfococcus oleovorans Hxd3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009943  Dole_0107  ribosomal L11 methyltransferase  100 
 
 
290 aa  590  1e-167  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0225  ribosomal protein L11 methyltransferase  34.6 
 
 
306 aa  110  2.0000000000000002e-23  Geobacter sp. M21  Bacteria  n/a    normal 
 
 
-
 
NC_008609  Ppro_2959  ribosomal protein L11 methyltransferase  40.44 
 
 
309 aa  105  8e-22  Pelobacter propionicus DSM 2379  Bacteria  unclonable  0.00000000148567  n/a   
 
 
-
 
NC_011146  Gbem_0241  ribosomal protein L11 methyltransferase  32.86 
 
 
306 aa  105  9e-22  Geobacter bemidjiensis Bem  Bacteria  unclonable  0.0000000356795  n/a   
 
 
-
 
NC_009483  Gura_4290  ribosomal protein L11 methyltransferase  33.49 
 
 
315 aa  103  2e-21  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.0000000135815  n/a   
 
 
-
 
NC_002939  GSU0447  ribosomal protein L11 methyltransferase  36.46 
 
 
299 aa  101  2e-20  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_3386  50S ribosomal protein L11P methyltransferase  33.17 
 
 
299 aa  100  3e-20  Geobacter metallireducens GS-15  Bacteria  normal  0.0387461  normal 
 
 
-
 
NC_007760  Adeh_0246  50S ribosomal protein L11P methyltransferase  38.38 
 
 
287 aa  99.4  6e-20  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.0486812  n/a   
 
 
-
 
NC_011891  A2cp1_0267  ribosomal protein L11 methyltransferase  37.84 
 
 
287 aa  96.7  4e-19  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.0167166  n/a   
 
 
-
 
NC_011145  AnaeK_0256  ribosomal protein L11 methyltransferase  37.84 
 
 
287 aa  96.7  4e-19  Anaeromyxobacter sp. K  Bacteria  normal  0.204257  n/a   
 
 
-
 
NC_010814  Glov_0996  ribosomal protein L11 methyltransferase  31.13 
 
 
305 aa  95.9  6e-19  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_008530  LGAS_0855  ribosomal protein L11 methyltransferase  27.06 
 
 
315 aa  96.3  6e-19  Lactobacillus gasseri ATCC 33323  Bacteria  hitchhiker  0.0000257486  normal 
 
 
-
 
NC_007404  Tbd_0180  ribosomal protein L11 methyltransferase  38.37 
 
 
296 aa  95.1  1e-18  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.0841101 
 
 
-
 
NC_007644  Moth_0573  50S ribosomal protein L11P methyltransferase  32.55 
 
 
318 aa  91.7  1e-17  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_0972  ribosomal protein L11 methyltransferase  33.91 
 
 
315 aa  92  1e-17  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_008261  CPF_2284  ribosomal protein L11 methyltransferase  29.36 
 
 
313 aa  90.1  4e-17  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_1999  ribosomal protein L11 methyltransferase  28.9 
 
 
313 aa  88.6  1e-16  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_010682  Rpic_3033  ribosomal protein L11 methyltransferase  32.26 
 
 
298 aa  87.8  2e-16  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_3897  ribosomal protein L11 methyltransferase  34.41 
 
 
290 aa  87.8  2e-16  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.147825 
 
 
-
 
NC_013440  Hoch_0096  ribosomal L11 methyltransferase  34.38 
 
 
303 aa  86.7  4e-16  Haliangium ochraceum DSM 14365  Bacteria  normal  normal 
 
 
-
 
NC_009379  Pnuc_0208  ribosomal protein L11 methyltransferase  28.02 
 
 
506 aa  86.3  5e-16  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  hitchhiker  0.00971698  n/a   
 
 
-
 
NC_008825  Mpe_A3208  ribosomal protein L11 methyltransferase  33.84 
 
 
300 aa  86.3  6e-16  Methylibium petroleiphilum PM1  Bacteria  normal  0.0770215  decreased coverage  0.00369905 
 
 
-
 
NC_013517  Sterm_2691  ribosomal protein L11 methyltransferase  28.64 
 
 
303 aa  85.9  6e-16  Sebaldella termitidis ATCC 33386  Bacteria  hitchhiker  0.00000606205  n/a   
 
 
-
 
NC_010424  Daud_0465  ribosomal L11 methyltransferase  37.58 
 
 
292 aa  85.9  8e-16  Candidatus Desulforudis audaxviator MP104C  Bacteria  normal  n/a   
 
 
-
 
NC_012856  Rpic12D_2623  ribosomal protein L11 methyltransferase  30.41 
 
 
298 aa  84.7  0.000000000000002  Ralstonia pickettii 12D  Bacteria  normal  normal  0.906319 
 
 
-
 
NC_011831  Cagg_1724  ribosomal protein L11 methyltransferase  30.93 
 
 
327 aa  83.6  0.000000000000003  Chloroflexus aggregans DSM 9485  Bacteria  normal  normal 
 
 
-
 
NC_010184  BcerKBAB4_4163  ribosomal protein L11 methyltransferase  32.62 
 
 
312 aa  83.6  0.000000000000004  Bacillus weihenstephanensis KBAB4  Bacteria  hitchhiker  0.000153463  n/a   
 
 
-
 
NC_007614  Nmul_A2751  ribosomal protein L11 methyltransferase  29.15 
 
 
304 aa  83.6  0.000000000000004  Nitrosospira multiformis ATCC 25196  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_3390  ribosomal protein L11 methyltransferase  32.11 
 
 
297 aa  83.2  0.000000000000004  Polaromonas naphthalenivorans CJ2  Bacteria  normal  normal  0.375634 
 
 
-
 
NC_003295  RSc2788  ribosomal protein L11 methyltransferase  30.88 
 
 
298 aa  82.8  0.000000000000007  Ralstonia solanacearum GMI1000  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_1101  ribosomal protein L11 methyltransferase  32.11 
 
 
298 aa  82.8  0.000000000000007  Polaromonas sp. JS666  Bacteria  normal  0.0205003  normal 
 
 
-
 
NC_004310  BR1417  ribosomal protein L11 methyltransferase  33.52 
 
 
285 aa  81.6  0.00000000000001  Brucella suis 1330  Bacteria  normal  n/a   
 
 
-
 
NC_008531  LEUM_1188  ribosomal protein L11 methyltransferase  35.29 
 
 
296 aa  82  0.00000000000001  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  normal  0.158292  n/a   
 
 
-
 
NC_003909  BCE_4393  ribosomal protein L11 methyltransferase  32.74 
 
 
312 aa  80.9  0.00000000000002  Bacillus cereus ATCC 10987  Bacteria  hitchhiker  0.000946748  n/a   
 
 
-
 
NC_011772  BCG9842_B0805  ribosomal protein L11 methyltransferase  34.52 
 
 
312 aa  80.9  0.00000000000002  Bacillus cereus G9842  Bacteria  hitchhiker  0.000000461178  decreased coverage  1.14716e-22 
 
 
-
 
NC_006369  lpl0503  ribosomal protein L11 methyltransferase  31.94 
 
 
289 aa  81.3  0.00000000000002  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_010531  Pnec_0228  ribosomal protein L11 methyltransferase  29.06 
 
 
328 aa  81.3  0.00000000000002  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  hitchhiker  0.00278387  normal 
 
 
-
 
NC_012791  Vapar_0951  ribosomal protein L11 methyltransferase  31.31 
 
 
294 aa  81.3  0.00000000000002  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_4297  ribosomal protein L11 methyltransferase  33.33 
 
 
312 aa  81.3  0.00000000000002  Desulfitobacterium hafniense DCB-2  Bacteria  hitchhiker  0.000247915  n/a   
 
 
-
 
NC_009457  VC0395_A2687  ribosomal protein L11 methyltransferase  35.91 
 
 
295 aa  80.5  0.00000000000003  Vibrio cholerae O395  Bacteria  hitchhiker  0.000011349  n/a   
 
 
-
 
NC_013411  GYMC61_1015  ribosomal protein L11 methyltransferase  30.14 
 
 
312 aa  80.1  0.00000000000004  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_006368  lpp0527  ribosomal protein L11 methyltransferase  31.94 
 
 
289 aa  80.1  0.00000000000004  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_009674  Bcer98_3038  ribosomal protein L11 methyltransferase  32.74 
 
 
312 aa  80.1  0.00000000000004  Bacillus cytotoxicus NVH 391-98  Bacteria  decreased coverage  0.00000244532  n/a   
 
 
-
 
NC_008527  LACR_0089  ribosomal protein L11 methyltransferase  29.81 
 
 
317 aa  79.7  0.00000000000005  Lactococcus lactis subsp. cremoris SK11  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_3376  ribosomal protein L11 methyltransferase  26.29 
 
 
295 aa  79.3  0.00000000000006  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_005945  BAS4211  ribosomal protein L11 methyltransferase  33.93 
 
 
312 aa  79.3  0.00000000000007  Bacillus anthracis str. Sterne  Bacteria  hitchhiker  0.000228671  n/a   
 
 
-
 
NC_005957  BT9727_4049  ribosomal protein L11 methyltransferase  33.93 
 
 
312 aa  79.3  0.00000000000007  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  hitchhiker  0.0005166  n/a   
 
 
-
 
NC_006274  BCZK4059  ribosomal protein L11 methyltransferase  33.93 
 
 
312 aa  79.3  0.00000000000007  Bacillus cereus E33L  Bacteria  hitchhiker  0.000479623  n/a   
 
 
-
 
NC_011773  BCAH820_4334  ribosomal protein L11 methyltransferase  33.93 
 
 
312 aa  79.3  0.00000000000007  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  5.10013e-48 
 
 
-
 
NC_011658  BCAH187_A4445  ribosomal protein L11 methyltransferase  33.93 
 
 
312 aa  79.3  0.00000000000007  Bacillus cereus AH187  Bacteria  unclonable  0.00000000232951  n/a   
 
 
-
 
NC_008786  Veis_1491  ribosomal protein L11 methyltransferase  32.66 
 
 
307 aa  79.3  0.00000000000007  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_007530  GBAA_4537  ribosomal protein L11 methyltransferase  33.93 
 
 
312 aa  79.3  0.00000000000007  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.0104704  n/a   
 
 
-
 
NC_009675  Anae109_0267  ribosomal protein L11 methyltransferase  35.68 
 
 
286 aa  79.3  0.00000000000007  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.210387 
 
 
-
 
NC_011725  BCB4264_A4431  ribosomal protein L11 methyltransferase  32.74 
 
 
312 aa  79.3  0.00000000000007  Bacillus cereus B4264  Bacteria  hitchhiker  0.00225658  n/a   
 
 
-
 
NC_013205  Aaci_1994  ribosomal protein L11 methyltransferase  32.95 
 
 
316 aa  79.3  0.00000000000008  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.467353  n/a   
 
 
-
 
NC_011369  Rleg2_2573  ribosomal protein L11 methyltransferase  33.9 
 
 
292 aa  79.3  0.00000000000008  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.316492  normal 
 
 
-
 
NC_007347  Reut_A2867  ribosomal protein L11 methyltransferase  30.48 
 
 
297 aa  78.6  0.0000000000001  Ralstonia eutropha JMP134  Bacteria  normal  0.712304  n/a   
 
 
-
 
NC_007298  Daro_3937  ribosomal protein L11 methyltransferase  33.72 
 
 
296 aa  78.2  0.0000000000002  Dechloromonas aromatica RCB  Bacteria  hitchhiker  0.0015501  normal 
 
 
-
 
NC_013421  Pecwa_0243  ribosomal protein L11 methyltransferase  31.58 
 
 
295 aa  77.8  0.0000000000002  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_2834  ribosomal protein L11 methyltransferase  36.05 
 
 
292 aa  77.8  0.0000000000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.180106  normal  0.0556009 
 
 
-
 
NC_009832  Spro_4421  ribosomal protein L11 methyltransferase  32.16 
 
 
293 aa  78.2  0.0000000000002  Serratia proteamaculans 568  Bacteria  hitchhiker  0.00260494  normal 
 
 
-
 
NC_010002  Daci_1496  ribosomal protein L11 methyltransferase  31.82 
 
 
296 aa  77.8  0.0000000000002  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_008709  Ping_3214  methyltransferase of 50S ribosomal subunit protein L11  30.96 
 
 
311 aa  78.2  0.0000000000002  Psychromonas ingrahamii 37  Bacteria  normal  normal  0.450631 
 
 
-
 
NC_012793  GWCH70_2435  ribosomal protein L11 methyltransferase  27.24 
 
 
315 aa  77.4  0.0000000000003  Geobacillus sp. WCH70  Bacteria  normal  0.0183971  n/a   
 
 
-
 
NC_009708  YpsIP31758_0388  ribosomal protein L11 methyltransferase  33.91 
 
 
293 aa  77  0.0000000000004  Yersinia pseudotuberculosis IP 31758  Bacteria  hitchhiker  0.00000022526  n/a   
 
 
-
 
NC_012880  Dd703_3687  ribosomal protein L11 methyltransferase  31.58 
 
 
295 aa  76.6  0.0000000000004  Dickeya dadantii Ech703  Bacteria  normal  0.768619  n/a   
 
 
-
 
NC_012917  PC1_0239  ribosomal protein L11 methyltransferase  31.58 
 
 
295 aa  76.6  0.0000000000004  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A1210  ribosomal protein L11 methyltransferase  36.02 
 
 
306 aa  76.6  0.0000000000004  Yersinia pestis Angola  Bacteria  hitchhiker  0.0000191055  normal  0.886421 
 
 
-
 
NC_010465  YPK_0454  ribosomal protein L11 methyltransferase  33.91 
 
 
293 aa  77  0.0000000000004  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.281322  n/a   
 
 
-
 
NC_007973  Rmet_3066  ribosomal protein L11 methyltransferase  31.55 
 
 
304 aa  76.6  0.0000000000004  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_008312  Tery_4195  ribosomal protein L11 methyltransferase  28.81 
 
 
297 aa  76.6  0.0000000000004  Trichodesmium erythraeum IMS101  Bacteria  normal  normal 
 
 
-
 
NC_008532  STER_0196  ribosomal protein L11 methyltransferase  28.08 
 
 
317 aa  76.6  0.0000000000004  Streptococcus thermophilus LMD-9  Bacteria  normal  0.886747  n/a   
 
 
-
 
NC_009486  Tpet_1665  ribosomal L11 methyltransferase  34.31 
 
 
264 aa  76.6  0.0000000000005  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_013216  Dtox_3219  ribosomal protein L11 methyltransferase  31.64 
 
 
307 aa  76.3  0.0000000000005  Desulfotomaculum acetoxidans DSM 771  Bacteria  hitchhiker  0.0000000607744  hitchhiker  0.0000170628 
 
 
-
 
NC_007498  Pcar_3080  ribosomal protein L11 methyltransferase  34.31 
 
 
307 aa  76.3  0.0000000000006  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_2494  ribosomal protein L11 methyltransferase  30.5 
 
 
308 aa  75.9  0.0000000000007  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.00440175  n/a   
 
 
-
 
NC_010571  Oter_1674  ribosomal L11 methyltransferase  36.21 
 
 
295 aa  75.9  0.0000000000008  Opitutus terrae PB90-1  Bacteria  normal  normal  0.116281 
 
 
-
 
NC_009513  Lreu_0718  ribosomal protein L11 methyltransferase  31.64 
 
 
319 aa  75.5  0.0000000000009  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.0000000000247625  n/a   
 
 
-
 
NC_011901  Tgr7_0367  ribosomal protein L11 methyltransferase  33.14 
 
 
290 aa  75.5  0.0000000000009  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_002976  SERP1146  ribosomal protein L11 methyltransferase  29.5 
 
 
312 aa  75.1  0.000000000001  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_013422  Hneap_1372  ribosomal protein L11 methyltransferase  32.66 
 
 
303 aa  75.1  0.000000000001  Halothiobacillus neapolitanus c2  Bacteria  normal  0.71577  n/a   
 
 
-
 
NC_011899  Hore_12780  ribosomal protein L11 methyltransferase  33.33 
 
 
289 aa  75.1  0.000000000001  Halothermothrix orenii H 168  Bacteria  decreased coverage  0.0000157571  n/a   
 
 
-
 
NC_009976  P9211_14081  ribosomal protein L11 methyltransferase  29.94 
 
 
305 aa  75.5  0.000000000001  Prochlorococcus marinus str. MIT 9211  Bacteria  normal  0.0500355  normal  0.0701563 
 
 
-
 
NC_010483  TRQ2_1738  ribosomal L11 methyltransferase  34.31 
 
 
264 aa  75.1  0.000000000001  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_0859  ribosomal protein L11 methyltransferase  30.3 
 
 
293 aa  74.7  0.000000000002  Acidovorax citrulli AAC00-1  Bacteria  normal  0.236714  normal  0.0659327 
 
 
-
 
NC_009487  SaurJH9_1636  ribosomal protein L11 methyltransferase  26.16 
 
 
312 aa  74.3  0.000000000002  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.0215506  n/a   
 
 
-
 
NC_004116  SAG1969  ribosomal protein L11 methyltransferase  28.02 
 
 
317 aa  74.7  0.000000000002  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_009667  Oant_1759  ribosomal protein L11 methyltransferase  32.4 
 
 
298 aa  74.3  0.000000000002  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.608796  n/a   
 
 
-
 
NC_007963  Csal_2286  50S ribosomal protein L11P methyltransferase  34.09 
 
 
299 aa  74.7  0.000000000002  Chromohalobacter salexigens DSM 3043  Bacteria  normal  n/a   
 
 
-
 
NC_014212  Mesil_1998  ribosomal L11 methyltransferase  34.36 
 
 
253 aa  74.3  0.000000000002  Meiothermus silvanus DSM 9946  Bacteria  normal  0.831895  normal 
 
 
-
 
NC_011662  Tmz1t_3447  ribosomal protein L11 methyltransferase  37.84 
 
 
300 aa  74.7  0.000000000002  Thauera sp. MZ1T  Bacteria  normal  0.801921  n/a   
 
 
-
 
NC_008309  HS_0566  ribosomal protein L11 methyltransferase  31.79 
 
 
296 aa  74.3  0.000000000002  Haemophilus somnus 129PT  Bacteria  normal  0.0178303  n/a   
 
 
-
 
NC_009632  SaurJH1_1670  ribosomal protein L11 methyltransferase  26.16 
 
 
312 aa  74.3  0.000000000002  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_00173  ribosomal protein L11 methyltransferase  32.92 
 
 
295 aa  73.6  0.000000000003  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_003910  CPS_0540  ribosomal protein L11 methyltransferase  34.9 
 
 
293 aa  73.6  0.000000000003  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_3845  ribosomal protein L11 methyltransferase  36.24 
 
 
295 aa  73.9  0.000000000003  Dickeya zeae Ech1591  Bacteria  normal  0.393013  n/a   
 
 
-
 
NC_009972  Haur_3109  ribosomal protein L11 methyltransferase  27.59 
 
 
321 aa  73.6  0.000000000004  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.00713701  n/a   
 
 
-
 
NC_011898  Ccel_1796  ribosomal protein L11 methyltransferase  27.45 
 
 
316 aa  73.2  0.000000000005  Clostridium cellulolyticum H10  Bacteria  normal  0.508174  n/a   
 
 
-
 
NC_008782  Ajs_3637  ribosomal protein L11 methyltransferase  31.03 
 
 
297 aa  73.2  0.000000000005  Acidovorax sp. JS42  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_2947  ribosomal protein L11 methyltransferase  31.03 
 
 
297 aa  73.2  0.000000000005  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
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