Gene Hoch_0096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_0096 
Symbol 
ID8542467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp148233 
End bp149144 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content72% 
IMG OID646384884 
Productribosomal L11 methyltransferase 
Protein accessionYP_003264630 
Protein GI262193421 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2264] Ribosomal protein L11 methylase 
TIGRFAM ID[TIGR00406] ribosomal protein L11 methyltransferase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGAAT GGGTCGAAAT CATCATTCCC GTGAACGCGT CGAGCGCCGA CGAGGTCGCC 
TCGCTGGTCG CCGACATCGT CCCCGAAGCG CTGCGCGGCA CCCAGGTGCG CGGCTCCGAG
GTGGTGATCT GGGTCGCCGC CAAGCGCCGC GACGAGATCC TGGGCACCAT CGGCCAAGCG
CTCTCGAATA TGGCCGAGTG CGGGCTCGAG GTCGATGCCG CGGGCGTGCG CGCGCGCGAG
GCCGCGCCCG AAGCCGAGTG GCGCGACCTG TGGAAGGAGT TCTTCCACAC CACCTATCTG
ACCGAGCATG TGGTGGTGGT GCCGAGCTGG GAGAAGCATG AGGCCAAGCC GGGCGAGATC
GTCATCCACC TCGATCCCGG TCAGGCTTTC GGCACCGGCG CCCACGCGTC CACGCGCCTG
GTGCTGGGCG AGCTCGAGGC GCTGCGCGCG CGCGGCGTCG AGGTGCAGCG CTGCTTCGAC
GTCGGCTGCG GCTCGGGCAT CCTGTTCATC GCCGCGGCCG GGATGTGGCC GGCGTGCTCG
GGAGTGGCCG TGGATATCGA TCCCCTGGCC GCGGACGCCA CGCTCGAGAA CTGCGAGCGC
AACGGCCTGA GCGAGCGCGT CGCGGTGTCG ACCACGCCCA CCGAGGAGGT CGACGGCGTC
TTCGATCTGG TGCTGGCCAA CATCCAGGCC GACGTGCTGC GCTCGCTGGC CGCGCCGCTC
ACGGCGCGGG TGGCGCCGGG CGGACACCTG GTGCTCTCGG GCCTGCTCAG CCACCAGGCC
GAGGCCGTGG GTCGCGATCT CGCGGCCGCG GGCGGGCTCG AGCTGCTGCA CACGCGCCCC
GACGACAGCG ATCCCGAGTG GAGCTCGGTG CTGCTCGCGC GTCCGGGCGC GGCCGCCAGC
GCGGCCGAGT GA
 
Protein sequence
MSEWVEIIIP VNASSADEVA SLVADIVPEA LRGTQVRGSE VVIWVAAKRR DEILGTIGQA 
LSNMAECGLE VDAAGVRARE AAPEAEWRDL WKEFFHTTYL TEHVVVVPSW EKHEAKPGEI
VIHLDPGQAF GTGAHASTRL VLGELEALRA RGVEVQRCFD VGCGSGILFI AAAGMWPACS
GVAVDIDPLA ADATLENCER NGLSERVAVS TTPTEEVDGV FDLVLANIQA DVLRSLAAPL
TARVAPGGHL VLSGLLSHQA EAVGRDLAAA GGLELLHTRP DDSDPEWSSV LLARPGAAAS
AAE