| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Lreu_0718 |
|---|
| Symbol | prmA |
|---|
| ID | 5189223 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Lactobacillus reuteri DSM 20016 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009513 |
|---|
| Strand | + |
|---|
| Start bp | 786921 |
|---|
| End bp | 787880 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640590551 |
|---|
| Product | ribosomal protein L11 methyltransferase |
|---|
| Protein accession | YP_001271319 |
|---|
| Protein GI | 148543949 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2264] Ribosomal protein L11 methylase |
|---|
| TIGRFAM ID | [TIGR00406] ribosomal protein L11 methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000000000247625 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTGGA CAGCAATAAA GGTAATAACT TCTAGTGAGG CTGTTGAAGC AGTTAGCTAT
ATTTTGACGG ATATGGGAGC ACAAGGCGTT CAAATTGAAG ATGCCGCTGA TTTTGCAAAC
TTACATGAGG GAAAGTATGG GGACCACGGT GAATTTATTG ATCCATCATC AATTCCGCAC
CGAAAAAATG GCGCAGCAGT ATCTGGATAT TTCCCCCAAA ACGTATTTGT TCCTGAACTA
TTGCCAACTA TCCATCAACG AGTAGCAAAA TTAAGGGAGT ACGGCTTGAA TCCAGGAGAA
AATGATGTTT CGGCAGCGAC CGTCGATAAT CAACAATGGG CAACAGTTTG GCAAAAGTAT
TATCACCCAT TAAGAGTAAC GGATCAGTTA ACGATTGTTC CGCAATGGGA AGAATACCAG
CCAGCAGATC CTAAAGAAAA ATTAATCTTT CTTGATCCAG GAATGGCTTT TGGCACCGGA
ACTCACCCAA CTACTCGTTT AATGCTTGAA GCCCTTGAAA AAACAATTGT TGGTAATGAA
TATGTAATCG ATGTCGGGAC AGGTTCTGGT GTTTTAAGTA TTGCTGCCAA GCACTTAGGA
GCAGGAAAAG TTGATGCTTA TGATATTGAC GAAGTAGCGG TCAACTCAGC AAAAAAGAAT
CTTGCACTAA ATCCGGTCGC TAAAGACGTT AAGGTTGGTA TAAATAGCCT GTTAGATGGA
ATCCATACCA AGGCAGATTT GATTGTGGCT AATATTCTTG CGGAAATCAT CGTGCCTCTT
ATTCCTCAAG CATACGAAAA TCTTAAACCG GGTGGCAAGT TCCTAGTTTC TGGAATCATT
GATGATAAGG CTCCGTTGAT TCGTCAAAAG TTGCAAGAGC AAGGATTCAT AATTGATGAT
GAGCAGCAGA TGAAGGACTG GCATGGAATG ATTGCCCACA AGCCAACCGA GGTGAAATAA
|
|---|
| Protein sequence | MDWTAIKVIT SSEAVEAVSY ILTDMGAQGV QIEDAADFAN LHEGKYGDHG EFIDPSSIPH
RKNGAAVSGY FPQNVFVPEL LPTIHQRVAK LREYGLNPGE NDVSAATVDN QQWATVWQKY
YHPLRVTDQL TIVPQWEEYQ PADPKEKLIF LDPGMAFGTG THPTTRLMLE ALEKTIVGNE
YVIDVGTGSG VLSIAAKHLG AGKVDAYDID EVAVNSAKKN LALNPVAKDV KVGINSLLDG
IHTKADLIVA NILAEIIVPL IPQAYENLKP GGKFLVSGII DDKAPLIRQK LQEQGFIIDD
EQQMKDWHGM IAHKPTEVK
|
|---|
| |