108 homologs were found in PanDaTox collection
for query gene Daci_3414 on replicon NC_010002
Organism: Delftia acidovorans SPH-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010002  Daci_3414  histone family protein nucleoid-structuring protein H-NS  100 
 
 
104 aa  216  6e-56  Delftia acidovorans SPH-1  Bacteria  normal  0.401376  hitchhiker  0.00103073 
 
 
-
 
NC_008781  Pnap_3939  histone-like nucleoid-structuring protein H-NS  35.23 
 
 
99 aa  53.5  0.000001  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.0681504  hitchhiker  0.000514453 
 
 
-
 
NC_010622  Bphy_0116  histone family protein nucleoid-structuring protein H-NS  37.5 
 
 
100 aa  52.4  0.000002  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_009074  BURPS668_2135  putative DNA-binding protein  40.32 
 
 
79 aa  50.4  0.000008  Burkholderia pseudomallei 668  Bacteria  normal  0.45202  n/a   
 
 
-
 
NC_010002  Daci_2158  histone family protein nucleoid-structuring protein H-NS  37.08 
 
 
96 aa  49.7  0.00001  Delftia acidovorans SPH-1  Bacteria  normal  0.232102  normal  0.811955 
 
 
-
 
NC_010625  Bphy_6772  histone family protein nucleoid-structuring protein H-NS  45.16 
 
 
254 aa  49.7  0.00001  Burkholderia phymatum STM815  Bacteria  decreased coverage  0.000000111168  normal  0.0541472 
 
 
-
 
NC_008782  Ajs_1144  histone family protein nucleoid-structuring protein H-NS  39.68 
 
 
98 aa  49.3  0.00002  Acidovorax sp. JS42  Bacteria  normal  0.439674  normal  0.582774 
 
 
-
 
NC_012857  Rpic12D_3721  histone family protein nucleoid-structuring protein H-NS  33.71 
 
 
96 aa  48.9  0.00002  Ralstonia pickettii 12D  Bacteria  decreased coverage  0.00112888  normal  0.513312 
 
 
-
 
NC_010627  Bphy_7383  histone family protein nucleoid-structuring protein H-NS  46.97 
 
 
254 aa  49.3  0.00002  Burkholderia phymatum STM815  Bacteria  normal  normal  0.160149 
 
 
-
 
NC_010678  Rpic_4798  histone family protein nucleoid-structuring protein H-NS  33.71 
 
 
96 aa  48.9  0.00002  Ralstonia pickettii 12J  Bacteria  normal  0.272454  normal  0.166506 
 
 
-
 
NC_011992  Dtpsy_1065  histone family protein nucleoid-structuring protein H-NS  39.68 
 
 
98 aa  49.3  0.00002  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B1833  histone-like nucleoid-structuring protein H-NS  33.72 
 
 
96 aa  48.5  0.00003  Burkholderia sp. 383  Bacteria  normal  0.648369  normal  0.932582 
 
 
-
 
NC_003296  RS00711  putative HNS-like transcription regulator protein  32.58 
 
 
96 aa  48.1  0.00004  Ralstonia solanacearum GMI1000  Bacteria  hitchhiker  0.0000172984  normal 
 
 
-
 
NC_010002  Daci_1913  histone family protein nucleoid-structuring protein H-NS  40.26 
 
 
95 aa  47.8  0.00005  Delftia acidovorans SPH-1  Bacteria  normal  hitchhiker  0.00000000183319 
 
 
-
 
NC_010002  Daci_4128  histone family protein nucleoid-structuring protein H-NS  40.26 
 
 
95 aa  47.8  0.00005  Delftia acidovorans SPH-1  Bacteria  normal  0.382519  hitchhiker  0.00000000510411 
 
 
-
 
NC_007650  BTH_II1558  H-NS histone family protein  31.33 
 
 
131 aa  47  0.00008  Burkholderia thailandensis E264  Bacteria  normal  0.752713  n/a   
 
 
-
 
NC_008825  Mpe_A1370  nucleoid protein H-NS  32.35 
 
 
115 aa  47  0.00008  Methylibium petroleiphilum PM1  Bacteria  normal  0.620152  normal 
 
 
-
 
NC_008759  Pnap_4886  histone family protein nucleoid-structuring protein H-NS  38.57 
 
 
114 aa  47  0.00009  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.602991  normal 
 
 
-
 
NC_008752  Aave_1150  histone family protein nucleoid-structuring protein H-NS  32.29 
 
 
99 aa  46.6  0.0001  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_3717  histone family protein nucleoid-structuring protein H-NS  39.29 
 
 
136 aa  46.6  0.0001  Delftia acidovorans SPH-1  Bacteria  normal  0.989758  hitchhiker  0.00118334 
 
 
-
 
NC_008390  Bamb_0195  histone family protein nucleoid-structuring protein H-NS  35.37 
 
 
97 aa  45.8  0.0002  Burkholderia ambifaria AMMD  Bacteria  normal  0.750004  n/a   
 
 
-
 
NC_012791  Vapar_1795  histone family protein nucleoid-structuring protein H-NS  30.1 
 
 
114 aa  46.2  0.0002  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_010086  Bmul_3279  histone family protein nucleoid-structuring protein H-NS  29.21 
 
 
97 aa  46.2  0.0002  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.0515948 
 
 
-
 
NC_010551  BamMC406_0209  histone family protein nucleoid-structuring protein H-NS  35.37 
 
 
97 aa  45.8  0.0002  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.726678 
 
 
-
 
NC_010679  Bphyt_7403  histone family protein nucleoid-structuring protein H-NS  31.18 
 
 
96 aa  46.2  0.0002  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_2825  histone-like nucleoid-structuring protein H-NS  35.37 
 
 
97 aa  45.1  0.0003  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_0281  histone family protein nucleoid-structuring protein H-NS  35.37 
 
 
97 aa  45.1  0.0003  Burkholderia cenocepacia HI2424  Bacteria  normal  0.166699  n/a   
 
 
-
 
NC_008789  Hhal_0441  histone family protein nucleoid-structuring protein H-NS  38.55 
 
 
124 aa  45.1  0.0003  Halorhodospira halophila SL1  Bacteria  normal  0.940607  n/a   
 
 
-
 
NC_009379  Pnuc_0838  histone family protein nucleoid-structuring protein H-NS  38.82 
 
 
94 aa  45.1  0.0003  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_3476  histone family protein nucleoid-structuring protein H-NS  42.19 
 
 
97 aa  45.4  0.0003  Delftia acidovorans SPH-1  Bacteria  normal  0.634664  normal 
 
 
-
 
NC_010508  Bcenmc03_0263  histone family protein nucleoid-structuring protein H-NS  35.37 
 
 
97 aa  45.1  0.0003  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.820493 
 
 
-
 
NC_010552  BamMC406_4070  histone family protein nucleoid-structuring protein H-NS  33.72 
 
 
95 aa  45.1  0.0003  Burkholderia ambifaria MC40-6  Bacteria  decreased coverage  0.000676326  normal 
 
 
-
 
NC_007650  BTH_II0088  DNA-binding protein BprA  27.38 
 
 
101 aa  45.1  0.0004  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I3224  DNA-binding protein BprA  27.38 
 
 
101 aa  45.1  0.0004  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_006349  BMAA0720  H-NS histone family protein  30.12 
 
 
96 aa  44.7  0.0005  Burkholderia mallei ATCC 23344  Bacteria  normal  0.232457  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0208  H-NS histone family protein  27.38 
 
 
101 aa  44.3  0.0005  Burkholderia pseudomallei 1710b  Bacteria  hitchhiker  0.00707733  n/a   
 
 
-
 
NC_007974  Rmet_3677  histone-like nucleoid-structuring protein H-NS  32 
 
 
102 aa  44.7  0.0005  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.166379 
 
 
-
 
NC_008391  Bamb_3595  histone family protein nucleoid-structuring protein H-NS  33.72 
 
 
95 aa  44.7  0.0005  Burkholderia ambifaria AMMD  Bacteria  normal  0.137974  normal 
 
 
-
 
NC_008835  BMA10229_0742  H-NS histone family protein  30.12 
 
 
104 aa  44.7  0.0005  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A0126  H-NS histone family protein  27.38 
 
 
101 aa  44.7  0.0005  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A1247  H-NS histone family protein  30.12 
 
 
96 aa  44.7  0.0005  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1174  H-NS histone family protein  30.12 
 
 
104 aa  44.7  0.0005  Burkholderia pseudomallei 1106a  Bacteria  normal  0.354816  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1616  H-NS histone family protein  27.38 
 
 
101 aa  44.3  0.0005  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A1706  H-NS histone family protein  30.12 
 
 
104 aa  44.7  0.0005  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_012849  Rpic12D_5158  histone family protein nucleoid-structuring protein H-NS  43.1 
 
 
97 aa  44.7  0.0005  Ralstonia pickettii 12D  Bacteria  normal  0.521264  normal  0.418842 
 
 
-
 
NC_007435  BURPS1710b_A2442  H-NS histone family protein  30.12 
 
 
131 aa  44.3  0.0006  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A0099  H-NS histone family protein  27.38 
 
 
101 aa  44.3  0.0006  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_012849  Rpic12D_5155  histone family protein nucleoid-structuring protein H-NS  34.69 
 
 
97 aa  43.9  0.0007  Ralstonia pickettii 12D  Bacteria  normal  0.336859  normal  0.425922 
 
 
-
 
NC_006348  BMA2905  H-NS histone family protein  35.37 
 
 
97 aa  43.9  0.0008  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A3384  histone-like nucleoid-structuring protein H-NS  34.15 
 
 
97 aa  43.9  0.0008  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I3155  H-NS histone family protein  35.37 
 
 
97 aa  43.9  0.0008  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3404  H-NS histone family protein  35.37 
 
 
97 aa  43.9  0.0008  Burkholderia mallei SAVP1  Bacteria  normal  0.237819  n/a   
 
 
-
 
NC_008789  Hhal_1489  histone family protein nucleoid-structuring protein H-NS  45.65 
 
 
115 aa  43.9  0.0008  Halorhodospira halophila SL1  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1636  H-NS histone family protein  35.37 
 
 
97 aa  43.9  0.0008  Burkholderia mallei NCTC 10229  Bacteria  normal  0.741416  n/a   
 
 
-
 
NC_009074  BURPS668_3827  H-NS histone family protein  35.37 
 
 
97 aa  43.9  0.0008  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_3909  H-NS histone family protein  35.37 
 
 
97 aa  43.9  0.0008  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2965  H-NS histone family protein  35.37 
 
 
97 aa  43.9  0.0008  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0048  H-NS histone family protein  35.37 
 
 
125 aa  43.5  0.001  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008062  Bcen_5671  histone-like nucleoid-structuring protein H-NS  46.94 
 
 
99 aa  43.1  0.001  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008392  Bamb_6089  histone family protein nucleoid-structuring protein H-NS  28.09 
 
 
109 aa  43.1  0.001  Burkholderia ambifaria AMMD  Bacteria  normal  0.817977  normal 
 
 
-
 
NC_008544  Bcen2424_6035  histone family protein nucleoid-structuring protein H-NS  46.94 
 
 
99 aa  43.1  0.001  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.401704 
 
 
-
 
NC_008786  Veis_1341  histone family protein nucleoid-structuring protein H-NS  63.33 
 
 
74 aa  42.7  0.001  Verminephrobacter eiseniae EF01-2  Bacteria  hitchhiker  0.000011697  hitchhiker  0.000659538 
 
 
-
 
NC_010084  Bmul_0190  histone family protein nucleoid-structuring protein H-NS  34.15 
 
 
97 aa  43.5  0.001  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.317548  hitchhiker  0.0000000190695 
 
 
-
 
NC_010087  Bmul_5767  histone family protein nucleoid-structuring protein H-NS  29.76 
 
 
99 aa  43.5  0.001  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_010512  Bcenmc03_6525  histone family protein nucleoid-structuring protein H-NS  46.94 
 
 
99 aa  43.1  0.001  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.381726 
 
 
-
 
NC_010515  Bcenmc03_4282  histone family protein nucleoid-structuring protein H-NS  41.86 
 
 
100 aa  43.5  0.001  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0105949  normal  0.0174683 
 
 
-
 
NC_010524  Lcho_2290  histone family protein nucleoid-structuring protein H-NS  30.3 
 
 
112 aa  43.5  0.001  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010557  BamMC406_5851  histone family protein nucleoid-structuring protein H-NS  28.09 
 
 
109 aa  43.1  0.001  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_4468  histone family protein nucleoid-structuring protein H-NS  36.17 
 
 
283 aa  43.1  0.001  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_2060  histone family protein nucleoid-structuring protein H-NS  34.88 
 
 
91 aa  43.5  0.001  Thauera sp. MZ1T  Bacteria  normal  0.0796579  n/a   
 
 
-
 
NC_003296  RS02604  putative HNS-like transcription regulator protein  48.78 
 
 
102 aa  42.4  0.002  Ralstonia solanacearum GMI1000  Bacteria  hitchhiker  0.00414449  normal  0.0842767 
 
 
-
 
NC_007348  Reut_B5596  nucleoid protein H-NS  32 
 
 
102 aa  42.7  0.002  Ralstonia eutropha JMP134  Bacteria  normal  0.16143  n/a   
 
 
-
 
NC_008061  Bcen_3154  histone-like nucleoid-structuring protein H-NS  30.59 
 
 
100 aa  42.4  0.002  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008062  Bcen_5743  histone-like nucleoid-structuring protein H-NS  26.97 
 
 
109 aa  42.4  0.002  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_5214  histone family protein nucleoid-structuring protein H-NS  30.59 
 
 
100 aa  42.4  0.002  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.319749 
 
 
-
 
NC_008544  Bcen2424_6107  histone family protein nucleoid-structuring protein H-NS  26.97 
 
 
109 aa  42.4  0.002  Burkholderia cenocepacia HI2424  Bacteria  normal  0.525668  normal 
 
 
-
 
NC_010087  Bmul_5655  histone family protein nucleoid-structuring protein H-NS  35.59 
 
 
128 aa  42.4  0.002  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_010512  Bcenmc03_6589  histone family protein nucleoid-structuring protein H-NS  26.97 
 
 
109 aa  42.4  0.002  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.768318  normal  0.0573169 
 
 
-
 
NC_010515  Bcenmc03_5060  histone family protein nucleoid-structuring protein H-NS  30.59 
 
 
100 aa  42.4  0.002  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_4348  histone family protein nucleoid-structuring protein H-NS  48.78 
 
 
102 aa  42.4  0.002  Ralstonia pickettii 12D  Bacteria  normal  normal  0.513312 
 
 
-
 
NC_010678  Rpic_4238  histone family protein nucleoid-structuring protein H-NS  48.78 
 
 
102 aa  42.4  0.002  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012855  Rpic12D_4934  histone family protein nucleoid-structuring protein H-NS  27.62 
 
 
103 aa  42  0.003  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007336  Reut_C6005  histone-like nucleoid-structuring protein H-NS  32.91 
 
 
103 aa  41.6  0.003  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007509  Bcep18194_C6596  histone-like nucleoid-structuring protein H-NS  55.88 
 
 
96 aa  41.6  0.003  Burkholderia sp. 383  Bacteria  normal  0.540075  normal 
 
 
-
 
NC_007509  Bcep18194_C7383  histone-like nucleoid-structuring protein H-NS  28.12 
 
 
102 aa  41.6  0.003  Burkholderia sp. 383  Bacteria  normal  normal  0.907507 
 
 
-
 
NC_010681  Bphyt_0398  histone family protein nucleoid-structuring protein H-NS  28.92 
 
 
100 aa  42  0.003  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_2580  histone family protein nucleoid-structuring protein H-NS  70.83 
 
 
119 aa  41.6  0.004  Acidovorax citrulli AAC00-1  Bacteria  normal  0.122678  normal  0.024514 
 
 
-
 
NC_010087  Bmul_6044  histone family protein nucleoid-structuring protein H-NS  28.09 
 
 
116 aa  41.2  0.004  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.304642 
 
 
-
 
NC_010681  Bphyt_0265  histone family protein nucleoid-structuring protein H-NS  40.35 
 
 
98 aa  41.2  0.004  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_1730  histone family protein nucleoid-structuring protein H-NS  35.62 
 
 
72 aa  41.6  0.004  Ralstonia pickettii 12J  Bacteria  normal  0.386763  normal  0.64236 
 
 
-
 
NC_003295  RSc0867  putative HNS-like transcription regulator protein  64.29 
 
 
96 aa  41.2  0.005  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.139885 
 
 
-
 
NC_007509  Bcep18194_C7449  histone-like nucleoid-structuring protein H-NS  44.9 
 
 
99 aa  41.2  0.005  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_009078  BURPS1106A_A2072  H-NS histone family protein  38.33 
 
 
96 aa  41.2  0.005  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_010512  Bcenmc03_6929  histone family protein nucleoid-structuring protein H-NS  30.12 
 
 
99 aa  41.2  0.005  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.599841  normal 
 
 
-
 
NC_007435  BURPS1710b_A0569  HNS-like transcription regulator protein  38.33 
 
 
100 aa  40.8  0.006  Burkholderia pseudomallei 1710b  Bacteria  normal  0.147609  n/a   
 
 
-
 
NC_008392  Bamb_6191  histone family protein nucleoid-structuring protein H-NS  27.08 
 
 
102 aa  40.8  0.006  Burkholderia ambifaria AMMD  Bacteria  normal  0.299615  normal 
 
 
-
 
NC_008835  BMA10229_2075  DNA-binding protein BprA  38.33 
 
 
100 aa  40.8  0.006  Burkholderia mallei NCTC 10229  Bacteria  normal  0.0585602  n/a   
 
 
-
 
NC_009079  BMA10247_A0755  H-NS histone family protein  38.33 
 
 
100 aa  40.8  0.006  Burkholderia mallei NCTC 10247  Bacteria  normal  0.0220992  n/a   
 
 
-
 
NC_010515  Bcenmc03_4633  histone family protein nucleoid-structuring protein H-NS  37.5 
 
 
101 aa  40.8  0.006  Burkholderia cenocepacia MC0-3  Bacteria  unclonable  0.000000000000292632  decreased coverage  0.0000243295 
 
 
-
 
NC_003296  RS02004  putative HNS-like transcription regulator protein  31.03 
 
 
95 aa  40.4  0.007  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0969964  normal 
 
 
-
 
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