205 homologs were found in PanDaTox collection
for query gene Bphyt_4468 on replicon NC_010676
Organism: Burkholderia phytofirmans PsJN



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010676  Bphyt_4468  histone family protein nucleoid-structuring protein H-NS  100 
 
 
283 aa  526  1e-148  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B0784  putative histone-like protein  89.23 
 
 
232 aa  232  6e-60  Burkholderia xenovorans LB400  Bacteria  normal  0.045774  normal 
 
 
-
 
NC_010623  Bphy_3585  histone family protein nucleoid-structuring protein H-NS  57.06 
 
 
191 aa  182  5.0000000000000004e-45  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B0144  histone-like nucleoid-structuring protein H-NS  52.47 
 
 
298 aa  180  2.9999999999999997e-44  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_6772  histone family protein nucleoid-structuring protein H-NS  54.97 
 
 
254 aa  170  2e-41  Burkholderia phymatum STM815  Bacteria  decreased coverage  0.000000111168  normal  0.0541472 
 
 
-
 
NC_010681  Bphyt_3707  histone family protein nucleoid-structuring protein H-NS  56.57 
 
 
217 aa  171  2e-41  Burkholderia phytofirmans PsJN  Bacteria  normal  0.258134  hitchhiker  0.00183478 
 
 
-
 
NC_010627  Bphy_7383  histone family protein nucleoid-structuring protein H-NS  50.29 
 
 
254 aa  140  1.9999999999999998e-32  Burkholderia phymatum STM815  Bacteria  normal  normal  0.160149 
 
 
-
 
NC_010623  Bphy_3850  histone family protein nucleoid-structuring protein H-NS  52.63 
 
 
239 aa  115  1.0000000000000001e-24  Burkholderia phymatum STM815  Bacteria  decreased coverage  0.000396096  normal  0.523489 
 
 
-
 
NC_010087  Bmul_5767  histone family protein nucleoid-structuring protein H-NS  36.7 
 
 
99 aa  72.4  0.000000000008  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_010086  Bmul_3806  histone family protein nucleoid-structuring protein H-NS  36.04 
 
 
100 aa  71.6  0.00000000001  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0101066  hitchhiker  0.00273603 
 
 
-
 
NC_007974  Rmet_4935  putative H-NS histon-like DNA-binding protein  40.54 
 
 
104 aa  70.9  0.00000000002  Cupriavidus metallidurans CH34  Bacteria  normal  0.529231  normal  0.833407 
 
 
-
 
NC_007509  Bcep18194_C6596  histone-like nucleoid-structuring protein H-NS  38.53 
 
 
96 aa  69.3  0.00000000007  Burkholderia sp. 383  Bacteria  normal  0.540075  normal 
 
 
-
 
NC_007651  BTH_I2714  DNA-binding protein BprA  36.04 
 
 
111 aa  69.3  0.00000000007  Burkholderia thailandensis E264  Bacteria  normal  0.344106  n/a   
 
 
-
 
NC_010515  Bcenmc03_5060  histone family protein nucleoid-structuring protein H-NS  38.74 
 
 
100 aa  69.3  0.00000000007  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_3154  histone-like nucleoid-structuring protein H-NS  38.74 
 
 
100 aa  69.3  0.00000000007  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_5214  histone family protein nucleoid-structuring protein H-NS  38.74 
 
 
100 aa  69.3  0.00000000007  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.319749 
 
 
-
 
NC_010512  Bcenmc03_6929  histone family protein nucleoid-structuring protein H-NS  36.7 
 
 
99 aa  69.3  0.00000000008  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.599841  normal 
 
 
-
 
NC_003296  RS00711  putative HNS-like transcription regulator protein  37.04 
 
 
96 aa  68.6  0.0000000001  Ralstonia solanacearum GMI1000  Bacteria  hitchhiker  0.0000172984  normal 
 
 
-
 
NC_007348  Reut_B4990  histone-like nucleoid-structuring protein H-NS  40 
 
 
104 aa  67.4  0.0000000003  Ralstonia eutropha JMP134  Bacteria  normal  0.0212879  n/a   
 
 
-
 
NC_012857  Rpic12D_3721  histone family protein nucleoid-structuring protein H-NS  37.04 
 
 
96 aa  65.9  0.0000000007  Ralstonia pickettii 12D  Bacteria  decreased coverage  0.00112888  normal  0.513312 
 
 
-
 
NC_010678  Rpic_4798  histone family protein nucleoid-structuring protein H-NS  37.04 
 
 
96 aa  65.9  0.0000000007  Ralstonia pickettii 12J  Bacteria  normal  0.272454  normal  0.166506 
 
 
-
 
NC_010084  Bmul_0158  histone family protein nucleoid-structuring protein H-NS  34.86 
 
 
98 aa  65.5  0.000000001  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007336  Reut_C6347  histone-like nucleoid-structuring protein H-NS  37.96 
 
 
516 aa  64.3  0.000000002  Ralstonia eutropha JMP134  Bacteria  decreased coverage  0.0000113528  n/a   
 
 
-
 
NC_006349  BMAA0365  H-NS histone family protein  70 
 
 
96 aa  63.9  0.000000003  Burkholderia mallei ATCC 23344  Bacteria  decreased coverage  0.00000040716  n/a   
 
 
-
 
NC_009079  BMA10247_A0401  H-NS histone family protein  70 
 
 
96 aa  63.9  0.000000003  Burkholderia mallei NCTC 10247  Bacteria  hitchhiker  0.000000304691  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2886  H-NS histone family protein  70 
 
 
96 aa  63.9  0.000000003  Burkholderia pseudomallei 1106a  Bacteria  hitchhiker  0.000145694  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1239  H-NS histone family protein  70 
 
 
96 aa  63.9  0.000000003  Burkholderia pseudomallei 1710b  Bacteria  unclonable  0.0000000000958752  n/a   
 
 
-
 
NC_007650  BTH_II2207  H-NS histone family protein  70 
 
 
96 aa  63.9  0.000000003  Burkholderia thailandensis E264  Bacteria  decreased coverage  0.0000000000144624  n/a   
 
 
-
 
NC_009075  BURPS668_A3002  H-NS histone family protein  70 
 
 
96 aa  63.9  0.000000003  Burkholderia pseudomallei 668  Bacteria  unclonable  0.00000000000000136233  n/a   
 
 
-
 
NC_010515  Bcenmc03_5567  histone family protein nucleoid-structuring protein H-NS  44.05 
 
 
99 aa  63.9  0.000000003  Burkholderia cenocepacia MC0-3  Bacteria  hitchhiker  0.000568054  normal  0.0551965 
 
 
-
 
NC_008784  BMASAVP1_1551  H-NS histone family protein  70 
 
 
96 aa  63.9  0.000000003  Burkholderia mallei SAVP1  Bacteria  unclonable  0.0000000000000358636  n/a   
 
 
-
 
NC_008835  BMA10229_1739  H-NS histone family protein  70 
 
 
96 aa  63.9  0.000000003  Burkholderia mallei NCTC 10229  Bacteria  unclonable  0.00000000000000443719  n/a   
 
 
-
 
NC_010623  Bphy_4285  histone family protein nucleoid-structuring protein H-NS  36.11 
 
 
97 aa  62.8  0.000000006  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_006349  BMAA0068  H-NS histone family protein  35.78 
 
 
99 aa  62  0.00000001  Burkholderia mallei ATCC 23344  Bacteria  unclonable  0.00000000181219  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1570  H-NS histone family protein  35.78 
 
 
173 aa  61.6  0.00000001  Burkholderia pseudomallei 1710b  Bacteria  unclonable  0.000000000103893  n/a   
 
 
-
 
NC_008062  Bcen_5671  histone-like nucleoid-structuring protein H-NS  38.18 
 
 
99 aa  62  0.00000001  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010512  Bcenmc03_6525  histone family protein nucleoid-structuring protein H-NS  38.18 
 
 
99 aa  62  0.00000001  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.381726 
 
 
-
 
NC_008544  Bcen2424_6035  histone family protein nucleoid-structuring protein H-NS  38.18 
 
 
99 aa  62  0.00000001  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.401704 
 
 
-
 
NC_008784  BMASAVP1_1225  H-NS histone family protein  35.78 
 
 
99 aa  62  0.00000001  Burkholderia mallei SAVP1  Bacteria  decreased coverage  0.000000000000571024  n/a   
 
 
-
 
NC_007336  Reut_C6382  histone-like nucleoid-structuring protein H-NS  46.05 
 
 
589 aa  61.2  0.00000002  Ralstonia eutropha JMP134  Bacteria  normal  0.493779  n/a   
 
 
-
 
NC_010551  BamMC406_0175  histone family protein nucleoid-structuring protein H-NS  32.11 
 
 
98 aa  60.8  0.00000002  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_010515  Bcenmc03_4282  histone family protein nucleoid-structuring protein H-NS  34.23 
 
 
100 aa  60.8  0.00000002  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0105949  normal  0.0174683 
 
 
-
 
NC_009078  BURPS1106A_A0079  H-NS histone family protein  35.78 
 
 
108 aa  60.8  0.00000002  Burkholderia pseudomallei 1106a  Bacteria  unclonable  0.0000151227  n/a   
 
 
-
 
NC_007509  Bcep18194_C7383  histone-like nucleoid-structuring protein H-NS  39.25 
 
 
102 aa  60.8  0.00000002  Burkholderia sp. 383  Bacteria  normal  normal  0.907507 
 
 
-
 
NC_009075  BURPS668_A0098  H-NS histone family protein  35.78 
 
 
108 aa  60.8  0.00000002  Burkholderia pseudomallei 668  Bacteria  unclonable  0.00000000000000405362  n/a   
 
 
-
 
NC_007511  Bcep18194_B0132  histone-like nucleoid-structuring protein H-NS  65 
 
 
99 aa  61.2  0.00000002  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010557  BamMC406_5922  histone family protein nucleoid-structuring protein H-NS  40.74 
 
 
102 aa  61.2  0.00000002  Burkholderia ambifaria MC40-6  Bacteria  normal  0.997127  normal  0.678214 
 
 
-
 
NC_008390  Bamb_0162  histone family protein nucleoid-structuring protein H-NS  32.11 
 
 
98 aa  60.8  0.00000002  Burkholderia ambifaria AMMD  Bacteria  normal  0.121985  n/a   
 
 
-
 
NC_008835  BMA10229_1506  H-NS histone family protein  35.78 
 
 
108 aa  60.8  0.00000002  Burkholderia mallei NCTC 10229  Bacteria  unclonable  0.00000000000000220305  n/a   
 
 
-
 
NC_010552  BamMC406_5397  histone family protein nucleoid-structuring protein H-NS  69.23 
 
 
98 aa  60.5  0.00000003  Burkholderia ambifaria MC40-6  Bacteria  normal  0.48701  normal  0.976542 
 
 
-
 
NC_007509  Bcep18194_C7449  histone-like nucleoid-structuring protein H-NS  36.7 
 
 
99 aa  60.5  0.00000003  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_5335  histone-like nucleoid-structuring protein H-NS  67.5 
 
 
101 aa  60.5  0.00000003  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008391  Bamb_4850  histone family protein nucleoid-structuring protein H-NS  69.23 
 
 
98 aa  60.5  0.00000003  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_008392  Bamb_6191  histone family protein nucleoid-structuring protein H-NS  39.81 
 
 
102 aa  60.5  0.00000003  Burkholderia ambifaria AMMD  Bacteria  normal  0.299615  normal 
 
 
-
 
NC_008543  Bcen2424_5527  histone family protein nucleoid-structuring protein H-NS  67.5 
 
 
101 aa  60.5  0.00000003  Burkholderia cenocepacia HI2424  Bacteria  normal  0.645148  normal 
 
 
-
 
NC_010002  Daci_3476  histone family protein nucleoid-structuring protein H-NS  41.05 
 
 
97 aa  60.5  0.00000003  Delftia acidovorans SPH-1  Bacteria  normal  0.634664  normal 
 
 
-
 
NC_010515  Bcenmc03_4746  histone family protein nucleoid-structuring protein H-NS  67.5 
 
 
101 aa  60.5  0.00000003  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.587516  normal 
 
 
-
 
NC_010622  Bphy_0116  histone family protein nucleoid-structuring protein H-NS  33.33 
 
 
100 aa  60.1  0.00000004  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_003296  RS02004  putative HNS-like transcription regulator protein  35.19 
 
 
95 aa  59.7  0.00000005  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0969964  normal 
 
 
-
 
NC_008060  Bcen_2858  histone-like nucleoid-structuring protein H-NS  32.11 
 
 
98 aa  59.7  0.00000005  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.259744  n/a   
 
 
-
 
NC_010508  Bcenmc03_0231  histone family protein nucleoid-structuring protein H-NS  32.11 
 
 
98 aa  59.7  0.00000005  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008542  Bcen2424_0249  histone family protein nucleoid-structuring protein H-NS  32.11 
 
 
98 aa  59.7  0.00000005  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_011992  Dtpsy_1065  histone family protein nucleoid-structuring protein H-NS  37.65 
 
 
98 aa  59.3  0.00000006  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_1144  histone family protein nucleoid-structuring protein H-NS  37.65 
 
 
98 aa  59.3  0.00000006  Acidovorax sp. JS42  Bacteria  normal  0.439674  normal  0.582774 
 
 
-
 
NC_010086  Bmul_3279  histone family protein nucleoid-structuring protein H-NS  67.5 
 
 
97 aa  59.3  0.00000007  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.0515948 
 
 
-
 
NC_006348  BMA2867  H-NS histone family protein  33.33 
 
 
98 aa  59.3  0.00000007  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0084  H-NS histone family protein  33.33 
 
 
98 aa  59.3  0.00000007  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B1833  histone-like nucleoid-structuring protein H-NS  35.19 
 
 
96 aa  59.3  0.00000007  Burkholderia sp. 383  Bacteria  normal  0.648369  normal  0.932582 
 
 
-
 
NC_009080  BMA10247_3109  H-NS histone family protein  33.33 
 
 
98 aa  59.3  0.00000007  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3862  H-NS histone family protein  33.33 
 
 
98 aa  59.3  0.00000007  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3442  H-NS histone family protein  33.33 
 
 
98 aa  59.3  0.00000007  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1677  H-NS histone family protein  33.33 
 
 
98 aa  59.3  0.00000007  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_3943  H-NS histone family protein  33.33 
 
 
98 aa  59.3  0.00000007  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_2158  histone family protein nucleoid-structuring protein H-NS  34.26 
 
 
96 aa  58.9  0.00000008  Delftia acidovorans SPH-1  Bacteria  normal  0.232102  normal  0.811955 
 
 
-
 
NC_007336  Reut_C6005  histone-like nucleoid-structuring protein H-NS  31.19 
 
 
103 aa  58.9  0.00000008  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_012855  Rpic12D_4689  histone family protein nucleoid-structuring protein H-NS  40.57 
 
 
92 aa  58.9  0.00000008  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_010679  Bphyt_7379  histone family protein nucleoid-structuring protein H-NS  71.88 
 
 
106 aa  58.9  0.00000009  Burkholderia phytofirmans PsJN  Bacteria  decreased coverage  0.00000893778  normal 
 
 
-
 
NC_003295  RSc0867  putative HNS-like transcription regulator protein  38.18 
 
 
96 aa  58.9  0.0000001  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.139885 
 
 
-
 
NC_009074  BURPS668_2135  putative DNA-binding protein  40.48 
 
 
79 aa  58.5  0.0000001  Burkholderia pseudomallei 668  Bacteria  normal  0.45202  n/a   
 
 
-
 
NC_012857  Rpic12D_4348  histone family protein nucleoid-structuring protein H-NS  33.33 
 
 
102 aa  58.5  0.0000001  Ralstonia pickettii 12D  Bacteria  normal  normal  0.513312 
 
 
-
 
NC_010678  Rpic_4238  histone family protein nucleoid-structuring protein H-NS  33.33 
 
 
102 aa  58.5  0.0000001  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_4070  histone family protein nucleoid-structuring protein H-NS  37.14 
 
 
95 aa  58.2  0.0000001  Burkholderia ambifaria MC40-6  Bacteria  decreased coverage  0.000676326  normal 
 
 
-
 
NC_007510  Bcep18194_A3351  histone-like nucleoid-structuring protein H-NS  33.03 
 
 
98 aa  57.4  0.0000002  Burkholderia sp. 383  Bacteria  normal  normal  0.383074 
 
 
-
 
NC_012849  Rpic12D_5158  histone family protein nucleoid-structuring protein H-NS  60 
 
 
97 aa  57.8  0.0000002  Ralstonia pickettii 12D  Bacteria  normal  0.521264  normal  0.418842 
 
 
-
 
NC_008391  Bamb_3595  histone family protein nucleoid-structuring protein H-NS  37.96 
 
 
95 aa  57.8  0.0000002  Burkholderia ambifaria AMMD  Bacteria  normal  0.137974  normal 
 
 
-
 
NC_010553  BamMC406_6696  histone family protein nucleoid-structuring protein H-NS  60 
 
 
98 aa  58.2  0.0000002  Burkholderia ambifaria MC40-6  Bacteria  normal  0.685774  normal  0.68943 
 
 
-
 
NC_010087  Bmul_5655  histone family protein nucleoid-structuring protein H-NS  67.65 
 
 
128 aa  57.4  0.0000003  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_3677  histone-like nucleoid-structuring protein H-NS  37.07 
 
 
102 aa  57  0.0000003  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.166379 
 
 
-
 
NC_007974  Rmet_5562  histone-like nucleoid-structuring protein H-NS  37.38 
 
 
104 aa  57.4  0.0000003  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_008392  Bamb_6382  histone family protein nucleoid-structuring protein H-NS  36.7 
 
 
99 aa  57  0.0000003  Burkholderia ambifaria AMMD  Bacteria  normal  0.193522  normal  0.0275568 
 
 
-
 
NC_010002  Daci_4128  histone family protein nucleoid-structuring protein H-NS  39.62 
 
 
95 aa  56.6  0.0000004  Delftia acidovorans SPH-1  Bacteria  normal  0.382519  hitchhiker  0.00000000510411 
 
 
-
 
NC_010002  Daci_1913  histone family protein nucleoid-structuring protein H-NS  39.62 
 
 
95 aa  56.6  0.0000004  Delftia acidovorans SPH-1  Bacteria  normal  hitchhiker  0.00000000183319 
 
 
-
 
NC_007650  BTH_II0088  DNA-binding protein BprA  32.11 
 
 
101 aa  56.6  0.0000005  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II1558  H-NS histone family protein  34.86 
 
 
131 aa  56.2  0.0000005  Burkholderia thailandensis E264  Bacteria  normal  0.752713  n/a   
 
 
-
 
NC_007651  BTH_I3224  DNA-binding protein BprA  32.11 
 
 
101 aa  56.6  0.0000005  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_0265  histone family protein nucleoid-structuring protein H-NS  33.03 
 
 
98 aa  56.2  0.0000005  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010557  BamMC406_6084  histone family protein nucleoid-structuring protein H-NS  64.71 
 
 
99 aa  56.2  0.0000006  Burkholderia ambifaria MC40-6  Bacteria  normal  0.78955  normal 
 
 
-
 
NC_007952  Bxe_B2975  putative H-NS-like transcription regulator  34.82 
 
 
96 aa  55.8  0.0000007  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008545  Bcen2424_6922  histone family protein nucleoid-structuring protein H-NS  63.89 
 
 
100 aa  55.8  0.0000007  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_6934  histone family protein nucleoid-structuring protein H-NS  34.82 
 
 
96 aa  55.5  0.000001  Burkholderia phytofirmans PsJN  Bacteria  normal  0.909068  normal 
 
 
-
 
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