Gene Pnap_3939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_3939 
Symbol 
ID4688922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp4205401 
End bp4205700 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content47% 
IMG OID639836957 
Producthistone-like nucleoid-structuring protein H-NS 
Protein accessionYP_984156 
Protein GI121606827 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0681504 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000514453 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCAACA CACTTCAGGA ACTTCTGGCA GAACGAGATG CACTTGACCA AAGAATCAAA 
GAACTGCAAG CCGAAGCTCG ACTCGAAGCC ATTTCTAACG TTTTATCGCT GATCGATAGG
CATGGCCTGA AAGAAAATGA CCTGTTTTCT TCTGGAACTT CCACTAAGAA AAACAAATAC
TCGGCCACGA AGGTACCTGC GAAGTACCGT GATTCAGAGA CAGGAAGTGA ATGGTCTGGC
CGTGGTATCC CCCCTGTATG GCTGCGTGGA AAAGACAAGA AGGATTACTT GATCGCCTGA
 
Protein sequence
MSNTLQELLA ERDALDQRIK ELQAEARLEA ISNVLSLIDR HGLKENDLFS SGTSTKKNKY 
SATKVPAKYR DSETGSEWSG RGIPPVWLRG KDKKDYLIA