212 homologs were found in PanDaTox collection
for query gene Bphy_6772 on replicon NC_010625
Organism: Burkholderia phymatum STM815



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010625  Bphy_6772  histone family protein nucleoid-structuring protein H-NS  100 
 
 
254 aa  477  1e-134  Burkholderia phymatum STM815  Bacteria  decreased coverage  0.000000111168  normal  0.0541472 
 
 
-
 
NC_010681  Bphyt_3707  histone family protein nucleoid-structuring protein H-NS  68.18 
 
 
217 aa  208  7e-53  Burkholderia phytofirmans PsJN  Bacteria  normal  0.258134  hitchhiker  0.00183478 
 
 
-
 
NC_010627  Bphy_7383  histone family protein nucleoid-structuring protein H-NS  68.42 
 
 
254 aa  207  1e-52  Burkholderia phymatum STM815  Bacteria  normal  normal  0.160149 
 
 
-
 
NC_007952  Bxe_B0144  histone-like nucleoid-structuring protein H-NS  59.36 
 
 
298 aa  206  3e-52  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_3585  histone family protein nucleoid-structuring protein H-NS  58.64 
 
 
191 aa  192  6e-48  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_4468  histone family protein nucleoid-structuring protein H-NS  50.72 
 
 
283 aa  168  7e-41  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007952  Bxe_B0784  putative histone-like protein  57.36 
 
 
232 aa  122  4e-27  Burkholderia xenovorans LB400  Bacteria  normal  0.045774  normal 
 
 
-
 
NC_010623  Bphy_3850  histone family protein nucleoid-structuring protein H-NS  54.39 
 
 
239 aa  114  2.0000000000000002e-24  Burkholderia phymatum STM815  Bacteria  decreased coverage  0.000396096  normal  0.523489 
 
 
-
 
NC_012857  Rpic12D_3721  histone family protein nucleoid-structuring protein H-NS  45.71 
 
 
96 aa  84.3  0.000000000000002  Ralstonia pickettii 12D  Bacteria  decreased coverage  0.00112888  normal  0.513312 
 
 
-
 
NC_010678  Rpic_4798  histone family protein nucleoid-structuring protein H-NS  45.71 
 
 
96 aa  84.3  0.000000000000002  Ralstonia pickettii 12J  Bacteria  normal  0.272454  normal  0.166506 
 
 
-
 
NC_003296  RS00711  putative HNS-like transcription regulator protein  44.34 
 
 
96 aa  83.2  0.000000000000004  Ralstonia solanacearum GMI1000  Bacteria  hitchhiker  0.0000172984  normal 
 
 
-
 
NC_003296  RS02004  putative HNS-like transcription regulator protein  45.71 
 
 
95 aa  82  0.000000000000009  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0969964  normal 
 
 
-
 
NC_003295  RSc0867  putative HNS-like transcription regulator protein  45.71 
 
 
96 aa  81.3  0.00000000000001  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.139885 
 
 
-
 
NC_010086  Bmul_3806  histone family protein nucleoid-structuring protein H-NS  41.41 
 
 
100 aa  79.3  0.00000000000005  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0101066  hitchhiker  0.00273603 
 
 
-
 
NC_010087  Bmul_5767  histone family protein nucleoid-structuring protein H-NS  42.99 
 
 
99 aa  78.6  0.00000000000008  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_3154  histone-like nucleoid-structuring protein H-NS  38.68 
 
 
100 aa  78.2  0.0000000000001  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_5214  histone family protein nucleoid-structuring protein H-NS  38.68 
 
 
100 aa  78.2  0.0000000000001  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.319749 
 
 
-
 
NC_010515  Bcenmc03_5060  histone family protein nucleoid-structuring protein H-NS  38.68 
 
 
100 aa  78.2  0.0000000000001  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_007509  Bcep18194_C6596  histone-like nucleoid-structuring protein H-NS  42.31 
 
 
96 aa  76.6  0.0000000000003  Burkholderia sp. 383  Bacteria  normal  0.540075  normal 
 
 
-
 
NC_007951  Bxe_A0112  HNS-like transcriptional regulator  43.4 
 
 
100 aa  77  0.0000000000003  Burkholderia xenovorans LB400  Bacteria  decreased coverage  0.00000000000000994611  normal 
 
 
-
 
NC_010084  Bmul_0158  histone family protein nucleoid-structuring protein H-NS  40.19 
 
 
98 aa  76.3  0.0000000000004  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_3822  histone family protein nucleoid-structuring protein H-NS  42.45 
 
 
100 aa  76.3  0.0000000000005  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.000137841  normal 
 
 
-
 
NC_010512  Bcenmc03_6929  histone family protein nucleoid-structuring protein H-NS  40.57 
 
 
99 aa  75.9  0.0000000000007  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.599841  normal 
 
 
-
 
NC_010002  Daci_1710  histone family protein nucleoid-structuring protein H-NS  43.16 
 
 
93 aa  75.5  0.0000000000008  Delftia acidovorans SPH-1  Bacteria  normal  0.443687  normal  0.618525 
 
 
-
 
NC_006348  BMA2867  H-NS histone family protein  39.62 
 
 
98 aa  75.1  0.000000000001  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1677  H-NS histone family protein  39.62 
 
 
98 aa  75.1  0.000000000001  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0084  H-NS histone family protein  39.62 
 
 
98 aa  75.1  0.000000000001  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_3109  H-NS histone family protein  39.62 
 
 
98 aa  75.1  0.000000000001  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3862  H-NS histone family protein  39.62 
 
 
98 aa  75.1  0.000000000001  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_3943  H-NS histone family protein  39.62 
 
 
98 aa  75.1  0.000000000001  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3442  H-NS histone family protein  39.62 
 
 
98 aa  75.1  0.000000000001  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_007336  Reut_C6005  histone-like nucleoid-structuring protein H-NS  37.38 
 
 
103 aa  74.3  0.000000000002  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007509  Bcep18194_C7449  histone-like nucleoid-structuring protein H-NS  42.99 
 
 
99 aa  72  0.000000000008  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010508  Bcenmc03_0231  histone family protein nucleoid-structuring protein H-NS  39.25 
 
 
98 aa  71.6  0.00000000001  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_2858  histone-like nucleoid-structuring protein H-NS  39.25 
 
 
98 aa  71.6  0.00000000001  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.259744  n/a   
 
 
-
 
NC_008062  Bcen_5671  histone-like nucleoid-structuring protein H-NS  42.99 
 
 
99 aa  72  0.00000000001  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_0249  histone family protein nucleoid-structuring protein H-NS  39.25 
 
 
98 aa  71.6  0.00000000001  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_008544  Bcen2424_6035  histone family protein nucleoid-structuring protein H-NS  42.99 
 
 
99 aa  72  0.00000000001  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.401704 
 
 
-
 
NC_010512  Bcenmc03_6525  histone family protein nucleoid-structuring protein H-NS  42.99 
 
 
99 aa  72  0.00000000001  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.381726 
 
 
-
 
NC_008826  Mpe_B0416  nucleoid protein H-NS  41.58 
 
 
114 aa  71.6  0.00000000001  Methylibium petroleiphilum PM1  Bacteria  normal  0.0193878  hitchhiker  0.00866736 
 
 
-
 
NC_007348  Reut_B4990  histone-like nucleoid-structuring protein H-NS  39.45 
 
 
104 aa  71.2  0.00000000002  Ralstonia eutropha JMP134  Bacteria  normal  0.0212879  n/a   
 
 
-
 
NC_007509  Bcep18194_C7383  histone-like nucleoid-structuring protein H-NS  36.45 
 
 
102 aa  71.2  0.00000000002  Burkholderia sp. 383  Bacteria  normal  normal  0.907507 
 
 
-
 
NC_008390  Bamb_0162  histone family protein nucleoid-structuring protein H-NS  40.19 
 
 
98 aa  70.9  0.00000000002  Burkholderia ambifaria AMMD  Bacteria  normal  0.121985  n/a   
 
 
-
 
NC_010551  BamMC406_0175  histone family protein nucleoid-structuring protein H-NS  40.19 
 
 
98 aa  70.9  0.00000000002  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_007510  Bcep18194_A3351  histone-like nucleoid-structuring protein H-NS  39.25 
 
 
98 aa  70.1  0.00000000004  Burkholderia sp. 383  Bacteria  normal  normal  0.383074 
 
 
-
 
NC_007974  Rmet_4935  putative H-NS histon-like DNA-binding protein  37.27 
 
 
104 aa  69.7  0.00000000004  Cupriavidus metallidurans CH34  Bacteria  normal  0.529231  normal  0.833407 
 
 
-
 
NC_010557  BamMC406_6084  histone family protein nucleoid-structuring protein H-NS  36.45 
 
 
99 aa  69.3  0.00000000006  Burkholderia ambifaria MC40-6  Bacteria  normal  0.78955  normal 
 
 
-
 
NC_012855  Rpic12D_4689  histone family protein nucleoid-structuring protein H-NS  39.78 
 
 
92 aa  68.9  0.00000000007  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I3189  H-NS histone family protein  37.74 
 
 
98 aa  68.9  0.00000000007  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_4285  histone family protein nucleoid-structuring protein H-NS  39.05 
 
 
97 aa  68.9  0.00000000007  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_008392  Bamb_6382  histone family protein nucleoid-structuring protein H-NS  36.45 
 
 
99 aa  68.9  0.00000000008  Burkholderia ambifaria AMMD  Bacteria  normal  0.193522  normal  0.0275568 
 
 
-
 
NC_007650  BTH_II1558  H-NS histone family protein  38.89 
 
 
131 aa  68.6  0.00000000009  Burkholderia thailandensis E264  Bacteria  normal  0.752713  n/a   
 
 
-
 
NC_008825  Mpe_A3165  putative HNS-like transcription regulator protein  41.67 
 
 
118 aa  68.6  0.00000000009  Methylibium petroleiphilum PM1  Bacteria  normal  hitchhiker  0.00480481 
 
 
-
 
NC_007974  Rmet_5562  histone-like nucleoid-structuring protein H-NS  37.74 
 
 
104 aa  68.2  0.0000000001  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B1833  histone-like nucleoid-structuring protein H-NS  35.24 
 
 
96 aa  67.8  0.0000000002  Burkholderia sp. 383  Bacteria  normal  0.648369  normal  0.932582 
 
 
-
 
NC_007952  Bxe_B2975  putative H-NS-like transcription regulator  37.61 
 
 
96 aa  67.8  0.0000000002  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008392  Bamb_6191  histone family protein nucleoid-structuring protein H-NS  34.58 
 
 
102 aa  67.8  0.0000000002  Burkholderia ambifaria AMMD  Bacteria  normal  0.299615  normal 
 
 
-
 
NC_010553  BamMC406_6777  histone family protein nucleoid-structuring protein H-NS  34.29 
 
 
99 aa  67  0.0000000003  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_010087  Bmul_5655  histone family protein nucleoid-structuring protein H-NS  39.25 
 
 
128 aa  67  0.0000000003  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_008545  Bcen2424_6922  histone family protein nucleoid-structuring protein H-NS  37.61 
 
 
100 aa  66.2  0.0000000004  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_010557  BamMC406_5922  histone family protein nucleoid-structuring protein H-NS  34.58 
 
 
102 aa  66.6  0.0000000004  Burkholderia ambifaria MC40-6  Bacteria  normal  0.997127  normal  0.678214 
 
 
-
 
NC_007974  Rmet_3677  histone-like nucleoid-structuring protein H-NS  37.84 
 
 
102 aa  66.2  0.0000000005  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.166379 
 
 
-
 
NC_010622  Bphy_0116  histone family protein nucleoid-structuring protein H-NS  37.04 
 
 
100 aa  65.5  0.0000000009  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007336  Reut_C6347  histone-like nucleoid-structuring protein H-NS  39.09 
 
 
516 aa  65.1  0.000000001  Ralstonia eutropha JMP134  Bacteria  decreased coverage  0.0000113528  n/a   
 
 
-
 
NC_010002  Daci_3476  histone family protein nucleoid-structuring protein H-NS  41.41 
 
 
97 aa  65.1  0.000000001  Delftia acidovorans SPH-1  Bacteria  normal  0.634664  normal 
 
 
-
 
NC_012849  Rpic12D_5158  histone family protein nucleoid-structuring protein H-NS  47.66 
 
 
97 aa  65.1  0.000000001  Ralstonia pickettii 12D  Bacteria  normal  0.521264  normal  0.418842 
 
 
-
 
NC_007336  Reut_C6382  histone-like nucleoid-structuring protein H-NS  38.32 
 
 
589 aa  64.3  0.000000002  Ralstonia eutropha JMP134  Bacteria  normal  0.493779  n/a   
 
 
-
 
NC_010679  Bphyt_7379  histone family protein nucleoid-structuring protein H-NS  40.24 
 
 
106 aa  64.3  0.000000002  Burkholderia phytofirmans PsJN  Bacteria  decreased coverage  0.00000893778  normal 
 
 
-
 
NC_010676  Bphyt_6934  histone family protein nucleoid-structuring protein H-NS  34.26 
 
 
96 aa  64.3  0.000000002  Burkholderia phytofirmans PsJN  Bacteria  normal  0.909068  normal 
 
 
-
 
NC_010552  BamMC406_4070  histone family protein nucleoid-structuring protein H-NS  33.98 
 
 
95 aa  64.3  0.000000002  Burkholderia ambifaria MC40-6  Bacteria  decreased coverage  0.000676326  normal 
 
 
-
 
NC_010515  Bcenmc03_5567  histone family protein nucleoid-structuring protein H-NS  39.81 
 
 
99 aa  63.9  0.000000002  Burkholderia cenocepacia MC0-3  Bacteria  hitchhiker  0.000568054  normal  0.0551965 
 
 
-
 
NC_008391  Bamb_3595  histone family protein nucleoid-structuring protein H-NS  33.98 
 
 
95 aa  64.3  0.000000002  Burkholderia ambifaria AMMD  Bacteria  normal  0.137974  normal 
 
 
-
 
NC_010002  Daci_4071  histone family protein nucleoid-structuring protein H-NS  37.89 
 
 
95 aa  64.3  0.000000002  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.0737815 
 
 
-
 
NC_010002  Daci_1968  histone family protein nucleoid-structuring protein H-NS  43.48 
 
 
93 aa  64.3  0.000000002  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_0265  histone family protein nucleoid-structuring protein H-NS  34.55 
 
 
98 aa  63.5  0.000000003  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_006349  BMAA0720  H-NS histone family protein  36.11 
 
 
96 aa  63.5  0.000000003  Burkholderia mallei ATCC 23344  Bacteria  normal  0.232457  n/a   
 
 
-
 
NC_009075  BURPS668_A1247  H-NS histone family protein  36.11 
 
 
96 aa  63.5  0.000000003  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II2010  H-NS histone family protein  42.72 
 
 
99 aa  63.5  0.000000003  Burkholderia thailandensis E264  Bacteria  normal  0.0227527  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1174  H-NS histone family protein  36.11 
 
 
104 aa  63.2  0.000000004  Burkholderia pseudomallei 1106a  Bacteria  normal  0.354816  n/a   
 
 
-
 
NC_006348  BMA0864  H-NS histone family protein  38 
 
 
93 aa  63.2  0.000000004  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_1784  H-NS histone family protein  38 
 
 
93 aa  63.2  0.000000004  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_0668  H-NS histone family protein  38 
 
 
93 aa  63.2  0.000000004  Burkholderia mallei NCTC 10247  Bacteria  normal  0.0958724  n/a   
 
 
-
 
NC_009379  Pnuc_0838  histone family protein nucleoid-structuring protein H-NS  36.19 
 
 
94 aa  63.2  0.000000004  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I2686  H-NS histone family protein  38 
 
 
93 aa  63.2  0.000000004  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_1601  putative DNA-binding protein  38 
 
 
93 aa  63.2  0.000000004  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A0489  H-NS histone family protein  38 
 
 
93 aa  63.2  0.000000004  Burkholderia mallei NCTC 10229  Bacteria  normal  0.416523  n/a   
 
 
-
 
NC_010002  Daci_3934  histone family protein nucleoid-structuring protein H-NS  39.22 
 
 
91 aa  63.2  0.000000004  Delftia acidovorans SPH-1  Bacteria  normal  0.222409  normal  0.184824 
 
 
-
 
NC_009076  BURPS1106A_1623  H-NS histone family protein  38 
 
 
93 aa  63.2  0.000000004  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A1706  H-NS histone family protein  36.11 
 
 
104 aa  63.2  0.000000004  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1386  H-NS histone family protein  38 
 
 
93 aa  63.2  0.000000004  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_0742  H-NS histone family protein  36.11 
 
 
104 aa  63.2  0.000000004  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_010553  BamMC406_6696  histone family protein nucleoid-structuring protein H-NS  69.23 
 
 
98 aa  62.8  0.000000006  Burkholderia ambifaria MC40-6  Bacteria  normal  0.685774  normal  0.68943 
 
 
-
 
NC_007435  BURPS1710b_A2442  H-NS histone family protein  36.11 
 
 
131 aa  62.4  0.000000007  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_2981  histone family protein nucleoid-structuring protein H-NS  38.68 
 
 
100 aa  62.4  0.000000007  Burkholderia phymatum STM815  Bacteria  normal  0.207499  decreased coverage  0.0000000417224 
 
 
-
 
NC_006348  BMA2905  H-NS histone family protein  36.19 
 
 
97 aa  62  0.00000001  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I3155  H-NS histone family protein  36.19 
 
 
97 aa  62  0.00000001  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1636  H-NS histone family protein  36.19 
 
 
97 aa  62  0.00000001  Burkholderia mallei NCTC 10229  Bacteria  normal  0.741416  n/a   
 
 
-
 
NC_010515  Bcenmc03_4633  histone family protein nucleoid-structuring protein H-NS  40.57 
 
 
101 aa  61.6  0.00000001  Burkholderia cenocepacia MC0-3  Bacteria  unclonable  0.000000000000292632  decreased coverage  0.0000243295 
 
 
-
 
NC_009080  BMA10247_2965  H-NS histone family protein  36.19 
 
 
97 aa  62  0.00000001  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3404  H-NS histone family protein  36.19 
 
 
97 aa  62  0.00000001  Burkholderia mallei SAVP1  Bacteria  normal  0.237819  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>