| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_5155 |
|---|
| Symbol | |
|---|
| ID | 8007735 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012849 |
|---|
| Strand | - |
|---|
| Start bp | 55000 |
|---|
| End bp | 55293 |
|---|
| Gene Length | 294 bp |
|---|
| Protein Length | 97 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 644822367 |
|---|
| Product | histone family protein nucleoid-structuring protein H-NS |
|---|
| Protein accession | YP_002973627 |
|---|
| Protein GI | 241114152 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2916] DNA-binding protein H-NS |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.336859 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.425922 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAGCT ACAAAGACAT CGTCAAACAG ATTGCCGCCC TCCAGAAGGA AGCAGAAGCT
CTCAGGCAGA AGGAAATGCA AGCGGCAATC GTGGATATTC ACGAGAAGAT CGATCTGTAC
GGGCTCACGG CATTGGATCT CGGCTTCAAG GGCGACGGCG CGGCGAGAAG CAAGCCGCCG
GCCAAATACC GGGATGAGGC GGGTAATTCC TGGACGGGAC GTGGCAAGAG GCCAGGATGG
CTGGTTGCCC ATCTGAGTGC TGGCCGCCAG ATCGAAGAGT TTCTGACCGC CTAA
|
|---|
| Protein sequence | MTSYKDIVKQ IAALQKEAEA LRQKEMQAAI VDIHEKIDLY GLTALDLGFK GDGAARSKPP
AKYRDEAGNS WTGRGKRPGW LVAHLSAGRQ IEEFLTA
|
|---|
| |