Gene Daci_3414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_3414 
Symbol 
ID5749000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp3746590 
End bp3746904 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content60% 
IMG OID641298519 
Producthistone family protein nucleoid-structuring protein H-NS 
Protein accessionYP_001564437 
Protein GI160898855 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.401376 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.00103073 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGACAGCG AAGAGTTGGC GCAGTTGCGT CTGCAATATC ACGACTTGGG CGAGCGCATC 
AAGGTCGGCG AGGCTATGGC CAAAAAAGAA GCGCTCCAAA ACGCCAAGGA CTCAATGACG
GCCGCTGGCC TCACGGATGC TGAGATCGCG GCGCACTTCA GCAAAGTCCG CAAGCCCACT
GGCGTCAGTG GAATGAAAGT GCCCGCCAAA TACCGCGACC GGGCAACGAA CGCCACCTGG
ACGGGCCGCG GCAAAGCCCC CACTTGGTTC AACCAAGAGC GCGTGCAGGG TGGCCATATA
GAGCAGCTTC GCTGA
 
Protein sequence
MDSEELAQLR LQYHDLGERI KVGEAMAKKE ALQNAKDSMT AAGLTDAEIA AHFSKVRKPT 
GVSGMKVPAK YRDRATNATW TGRGKAPTWF NQERVQGGHI EQLR