234 homologs were found in PanDaTox collection
for query gene Rpic12D_5158 on replicon NC_012849
Organism: Ralstonia pickettii 12D



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012849  Rpic12D_5158  histone family protein nucleoid-structuring protein H-NS  100 
 
 
97 aa  192  2e-48  Ralstonia pickettii 12D  Bacteria  normal  0.521264  normal  0.418842 
 
 
-
 
NC_003296  RS00711  putative HNS-like transcription regulator protein  69.47 
 
 
96 aa  132  1.9999999999999998e-30  Ralstonia solanacearum GMI1000  Bacteria  hitchhiker  0.0000172984  normal 
 
 
-
 
NC_003296  RS02004  putative HNS-like transcription regulator protein  69.47 
 
 
95 aa  129  1.0000000000000001e-29  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0969964  normal 
 
 
-
 
NC_010678  Rpic_4798  histone family protein nucleoid-structuring protein H-NS  66.32 
 
 
96 aa  129  2.0000000000000002e-29  Ralstonia pickettii 12J  Bacteria  normal  0.272454  normal  0.166506 
 
 
-
 
NC_012857  Rpic12D_3721  histone family protein nucleoid-structuring protein H-NS  66.32 
 
 
96 aa  129  2.0000000000000002e-29  Ralstonia pickettii 12D  Bacteria  decreased coverage  0.00112888  normal  0.513312 
 
 
-
 
NC_003295  RSc0867  putative HNS-like transcription regulator protein  63.16 
 
 
96 aa  121  4e-27  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.139885 
 
 
-
 
NC_012855  Rpic12D_4689  histone family protein nucleoid-structuring protein H-NS  60.47 
 
 
92 aa  104  4e-22  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_5562  histone-like nucleoid-structuring protein H-NS  54.46 
 
 
104 aa  102  2e-21  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_4285  histone family protein nucleoid-structuring protein H-NS  52.08 
 
 
97 aa  99.4  2e-20  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007336  Reut_C6005  histone-like nucleoid-structuring protein H-NS  50.5 
 
 
103 aa  98.2  3e-20  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007974  Rmet_4935  putative H-NS histon-like DNA-binding protein  48.04 
 
 
104 aa  96.3  1e-19  Cupriavidus metallidurans CH34  Bacteria  normal  0.529231  normal  0.833407 
 
 
-
 
NC_007509  Bcep18194_C6596  histone-like nucleoid-structuring protein H-NS  58.16 
 
 
96 aa  95.9  2e-19  Burkholderia sp. 383  Bacteria  normal  0.540075  normal 
 
 
-
 
NC_009379  Pnuc_0838  histone family protein nucleoid-structuring protein H-NS  52.08 
 
 
94 aa  95.9  2e-19  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_010086  Bmul_3279  histone family protein nucleoid-structuring protein H-NS  47.37 
 
 
97 aa  94.7  4e-19  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal  0.0515948 
 
 
-
 
NC_010512  Bcenmc03_6929  histone family protein nucleoid-structuring protein H-NS  54.08 
 
 
99 aa  94.4  5e-19  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.599841  normal 
 
 
-
 
NC_008392  Bamb_6382  histone family protein nucleoid-structuring protein H-NS  54.08 
 
 
99 aa  94  6e-19  Burkholderia ambifaria AMMD  Bacteria  normal  0.193522  normal  0.0275568 
 
 
-
 
NC_010086  Bmul_3806  histone family protein nucleoid-structuring protein H-NS  54.17 
 
 
100 aa  93.6  9e-19  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0101066  hitchhiker  0.00273603 
 
 
-
 
NC_010676  Bphyt_6934  histone family protein nucleoid-structuring protein H-NS  50.52 
 
 
96 aa  92.4  2e-18  Burkholderia phytofirmans PsJN  Bacteria  normal  0.909068  normal 
 
 
-
 
NC_007348  Reut_B4990  histone-like nucleoid-structuring protein H-NS  50 
 
 
104 aa  92.4  2e-18  Ralstonia eutropha JMP134  Bacteria  normal  0.0212879  n/a   
 
 
-
 
NC_009074  BURPS668_2135  putative DNA-binding protein  59.21 
 
 
79 aa  92  2e-18  Burkholderia pseudomallei 668  Bacteria  normal  0.45202  n/a   
 
 
-
 
NC_010557  BamMC406_6084  histone family protein nucleoid-structuring protein H-NS  53.06 
 
 
99 aa  92.4  2e-18  Burkholderia ambifaria MC40-6  Bacteria  normal  0.78955  normal 
 
 
-
 
NC_007952  Bxe_B2975  putative H-NS-like transcription regulator  51.55 
 
 
96 aa  92.4  2e-18  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_0265  histone family protein nucleoid-structuring protein H-NS  50 
 
 
98 aa  92.4  2e-18  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_006348  BMA2905  H-NS histone family protein  48.45 
 
 
97 aa  91.3  4e-18  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0048  H-NS histone family protein  48.45 
 
 
125 aa  91.3  4e-18  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_010551  BamMC406_0209  histone family protein nucleoid-structuring protein H-NS  49.48 
 
 
97 aa  91.3  4e-18  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.726678 
 
 
-
 
NC_009080  BMA10247_2965  H-NS histone family protein  48.45 
 
 
97 aa  91.3  4e-18  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3827  H-NS histone family protein  48.45 
 
 
97 aa  91.3  4e-18  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007650  BTH_II2207  H-NS histone family protein  48.96 
 
 
96 aa  91.3  4e-18  Burkholderia thailandensis E264  Bacteria  decreased coverage  0.0000000000144624  n/a   
 
 
-
 
NC_007651  BTH_I3155  H-NS histone family protein  48.45 
 
 
97 aa  91.3  4e-18  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008390  Bamb_0195  histone family protein nucleoid-structuring protein H-NS  49.48 
 
 
97 aa  91.3  4e-18  Burkholderia ambifaria AMMD  Bacteria  normal  0.750004  n/a   
 
 
-
 
NC_008836  BMA10229_A1636  H-NS histone family protein  48.45 
 
 
97 aa  91.3  4e-18  Burkholderia mallei NCTC 10229  Bacteria  normal  0.741416  n/a   
 
 
-
 
NC_009076  BURPS1106A_3909  H-NS histone family protein  48.45 
 
 
97 aa  91.3  4e-18  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A3404  H-NS histone family protein  48.45 
 
 
97 aa  91.3  4e-18  Burkholderia mallei SAVP1  Bacteria  normal  0.237819  n/a   
 
 
-
 
NC_010002  Daci_4128  histone family protein nucleoid-structuring protein H-NS  53.06 
 
 
95 aa  90.9  5e-18  Delftia acidovorans SPH-1  Bacteria  normal  0.382519  hitchhiker  0.00000000510411 
 
 
-
 
NC_010002  Daci_1913  histone family protein nucleoid-structuring protein H-NS  53.06 
 
 
95 aa  90.9  5e-18  Delftia acidovorans SPH-1  Bacteria  normal  hitchhiker  0.00000000183319 
 
 
-
 
NC_007435  BURPS1710b_A1239  H-NS histone family protein  47.92 
 
 
96 aa  90.9  6e-18  Burkholderia pseudomallei 1710b  Bacteria  unclonable  0.0000000000958752  n/a   
 
 
-
 
NC_009075  BURPS668_A3002  H-NS histone family protein  47.92 
 
 
96 aa  90.9  6e-18  Burkholderia pseudomallei 668  Bacteria  unclonable  0.00000000000000136233  n/a   
 
 
-
 
NC_008060  Bcen_2825  histone-like nucleoid-structuring protein H-NS  49.48 
 
 
97 aa  90.9  6e-18  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_0263  histone family protein nucleoid-structuring protein H-NS  49.48 
 
 
97 aa  90.9  6e-18  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.820493 
 
 
-
 
NC_009079  BMA10247_A0401  H-NS histone family protein  47.92 
 
 
96 aa  90.9  6e-18  Burkholderia mallei NCTC 10247  Bacteria  hitchhiker  0.000000304691  n/a   
 
 
-
 
NC_008542  Bcen2424_0281  histone family protein nucleoid-structuring protein H-NS  49.48 
 
 
97 aa  90.9  6e-18  Burkholderia cenocepacia HI2424  Bacteria  normal  0.166699  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2886  H-NS histone family protein  47.92 
 
 
96 aa  90.9  6e-18  Burkholderia pseudomallei 1106a  Bacteria  hitchhiker  0.000145694  n/a   
 
 
-
 
NC_008835  BMA10229_1739  H-NS histone family protein  47.92 
 
 
96 aa  90.9  6e-18  Burkholderia mallei NCTC 10229  Bacteria  unclonable  0.00000000000000443719  n/a   
 
 
-
 
NC_008784  BMASAVP1_1551  H-NS histone family protein  47.92 
 
 
96 aa  90.9  6e-18  Burkholderia mallei SAVP1  Bacteria  unclonable  0.0000000000000358636  n/a   
 
 
-
 
NC_006349  BMAA0365  H-NS histone family protein  47.92 
 
 
96 aa  90.1  8e-18  Burkholderia mallei ATCC 23344  Bacteria  decreased coverage  0.00000040716  n/a   
 
 
-
 
NC_007650  BTH_II1558  H-NS histone family protein  48.45 
 
 
131 aa  90.5  8e-18  Burkholderia thailandensis E264  Bacteria  normal  0.752713  n/a   
 
 
-
 
NC_007510  Bcep18194_A3384  histone-like nucleoid-structuring protein H-NS  48.45 
 
 
97 aa  89.7  1e-17  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_0190  histone family protein nucleoid-structuring protein H-NS  48.45 
 
 
97 aa  89  2e-17  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.317548  hitchhiker  0.0000000190695 
 
 
-
 
NC_010515  Bcenmc03_4746  histone family protein nucleoid-structuring protein H-NS  46 
 
 
101 aa  88.2  3e-17  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.587516  normal 
 
 
-
 
NC_007511  Bcep18194_B0132  histone-like nucleoid-structuring protein H-NS  47.42 
 
 
99 aa  88.2  3e-17  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_008061  Bcen_3154  histone-like nucleoid-structuring protein H-NS  53 
 
 
100 aa  88.2  3e-17  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008061  Bcen_5335  histone-like nucleoid-structuring protein H-NS  46 
 
 
101 aa  88.2  3e-17  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_5214  histone family protein nucleoid-structuring protein H-NS  53 
 
 
100 aa  88.2  3e-17  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.319749 
 
 
-
 
NC_008543  Bcen2424_5527  histone family protein nucleoid-structuring protein H-NS  46 
 
 
101 aa  88.2  3e-17  Burkholderia cenocepacia HI2424  Bacteria  normal  0.645148  normal 
 
 
-
 
NC_010515  Bcenmc03_5060  histone family protein nucleoid-structuring protein H-NS  53 
 
 
100 aa  88.2  3e-17  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_1150  histone family protein nucleoid-structuring protein H-NS  48.42 
 
 
99 aa  87.4  5e-17  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_0158  histone family protein nucleoid-structuring protein H-NS  51.02 
 
 
98 aa  87.4  6e-17  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_010087  Bmul_5767  histone family protein nucleoid-structuring protein H-NS  52.04 
 
 
99 aa  87  7e-17  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_3476  histone family protein nucleoid-structuring protein H-NS  49.46 
 
 
97 aa  86.7  9e-17  Delftia acidovorans SPH-1  Bacteria  normal  0.634664  normal 
 
 
-
 
NC_010515  Bcenmc03_4282  histone family protein nucleoid-structuring protein H-NS  48.98 
 
 
100 aa  86.7  1e-16  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.0105949  normal  0.0174683 
 
 
-
 
NC_010002  Daci_2158  histone family protein nucleoid-structuring protein H-NS  43.75 
 
 
96 aa  85.9  2e-16  Delftia acidovorans SPH-1  Bacteria  normal  0.232102  normal  0.811955 
 
 
-
 
NC_011992  Dtpsy_1065  histone family protein nucleoid-structuring protein H-NS  47.37 
 
 
98 aa  85.9  2e-16  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_010508  Bcenmc03_0231  histone family protein nucleoid-structuring protein H-NS  51.02 
 
 
98 aa  85.5  2e-16  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_2858  histone-like nucleoid-structuring protein H-NS  51.02 
 
 
98 aa  85.5  2e-16  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.259744  n/a   
 
 
-
 
NC_008542  Bcen2424_0249  histone family protein nucleoid-structuring protein H-NS  51.02 
 
 
98 aa  85.5  2e-16  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_1144  histone family protein nucleoid-structuring protein H-NS  47.37 
 
 
98 aa  85.9  2e-16  Acidovorax sp. JS42  Bacteria  normal  0.439674  normal  0.582774 
 
 
-
 
NC_009078  BURPS1106A_A1174  H-NS histone family protein  46.39 
 
 
104 aa  84.7  4e-16  Burkholderia pseudomallei 1106a  Bacteria  normal  0.354816  n/a   
 
 
-
 
NC_010551  BamMC406_0175  histone family protein nucleoid-structuring protein H-NS  50 
 
 
98 aa  84.7  4e-16  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_008390  Bamb_0162  histone family protein nucleoid-structuring protein H-NS  50 
 
 
98 aa  84.7  4e-16  Burkholderia ambifaria AMMD  Bacteria  normal  0.121985  n/a   
 
 
-
 
NC_008392  Bamb_6191  histone family protein nucleoid-structuring protein H-NS  51.02 
 
 
102 aa  84.7  4e-16  Burkholderia ambifaria AMMD  Bacteria  normal  0.299615  normal 
 
 
-
 
NC_008835  BMA10229_0742  H-NS histone family protein  46.39 
 
 
104 aa  84.7  4e-16  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009079  BMA10247_A1706  H-NS histone family protein  46.39 
 
 
104 aa  84.7  4e-16  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_006349  BMAA0720  H-NS histone family protein  46.39 
 
 
96 aa  84.3  5e-16  Burkholderia mallei ATCC 23344  Bacteria  normal  0.232457  n/a   
 
 
-
 
NC_009075  BURPS668_A1247  H-NS histone family protein  46.39 
 
 
96 aa  84.3  5e-16  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A2442  H-NS histone family protein  46.39 
 
 
131 aa  84.3  5e-16  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A3351  histone-like nucleoid-structuring protein H-NS  50 
 
 
98 aa  84.3  5e-16  Burkholderia sp. 383  Bacteria  normal  normal  0.383074 
 
 
-
 
NC_007951  Bxe_A0112  HNS-like transcriptional regulator  49.49 
 
 
100 aa  84.3  5e-16  Burkholderia xenovorans LB400  Bacteria  decreased coverage  0.00000000000000994611  normal 
 
 
-
 
NC_010002  Daci_3934  histone family protein nucleoid-structuring protein H-NS  52.22 
 
 
91 aa  84.3  5e-16  Delftia acidovorans SPH-1  Bacteria  normal  0.222409  normal  0.184824 
 
 
-
 
NC_010557  BamMC406_5922  histone family protein nucleoid-structuring protein H-NS  51.02 
 
 
102 aa  84  6e-16  Burkholderia ambifaria MC40-6  Bacteria  normal  0.997127  normal  0.678214 
 
 
-
 
NC_010681  Bphyt_3822  histone family protein nucleoid-structuring protein H-NS  48.48 
 
 
100 aa  84  7e-16  Burkholderia phytofirmans PsJN  Bacteria  hitchhiker  0.000137841  normal 
 
 
-
 
NC_008785  BMASAVP1_A3442  H-NS histone family protein  47.96 
 
 
98 aa  83.6  8e-16  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA2867  H-NS histone family protein  47.96 
 
 
98 aa  83.6  8e-16  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_010622  Bphy_0116  histone family protein nucleoid-structuring protein H-NS  45.45 
 
 
100 aa  83.6  8e-16  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_007434  BURPS1710b_0084  H-NS histone family protein  47.96 
 
 
98 aa  83.6  8e-16  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_3109  H-NS histone family protein  47.96 
 
 
98 aa  83.6  8e-16  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3862  H-NS histone family protein  47.96 
 
 
98 aa  83.6  8e-16  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_3943  H-NS histone family protein  47.96 
 
 
98 aa  83.6  8e-16  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1677  H-NS histone family protein  47.96 
 
 
98 aa  83.6  8e-16  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_007511  Bcep18194_B1833  histone-like nucleoid-structuring protein H-NS  52.58 
 
 
96 aa  83.6  9e-16  Burkholderia sp. 383  Bacteria  normal  0.648369  normal  0.932582 
 
 
-
 
NC_008391  Bamb_4850  histone family protein nucleoid-structuring protein H-NS  52.08 
 
 
98 aa  83.2  0.000000000000001  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_5397  histone family protein nucleoid-structuring protein H-NS  52.08 
 
 
98 aa  83.2  0.000000000000001  Burkholderia ambifaria MC40-6  Bacteria  normal  0.48701  normal  0.976542 
 
 
-
 
NC_007509  Bcep18194_C7383  histone-like nucleoid-structuring protein H-NS  48.98 
 
 
102 aa  82  0.000000000000002  Burkholderia sp. 383  Bacteria  normal  normal  0.907507 
 
 
-
 
NC_010553  BamMC406_6777  histone family protein nucleoid-structuring protein H-NS  40.82 
 
 
99 aa  81.6  0.000000000000003  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_1968  histone family protein nucleoid-structuring protein H-NS  53.33 
 
 
93 aa  81.6  0.000000000000004  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_010512  Bcenmc03_6525  histone family protein nucleoid-structuring protein H-NS  55.1 
 
 
99 aa  80.9  0.000000000000005  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.381726 
 
 
-
 
NC_008062  Bcen_5671  histone-like nucleoid-structuring protein H-NS  55.1 
 
 
99 aa  80.9  0.000000000000005  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008544  Bcen2424_6035  histone family protein nucleoid-structuring protein H-NS  55.1 
 
 
99 aa  80.9  0.000000000000005  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.401704 
 
 
-
 
NC_010087  Bmul_5655  histone family protein nucleoid-structuring protein H-NS  54.08 
 
 
128 aa  80.5  0.000000000000007  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_009078  BURPS1106A_A0079  H-NS histone family protein  47.47 
 
 
108 aa  80.1  0.000000000000009  Burkholderia pseudomallei 1106a  Bacteria  unclonable  0.0000151227  n/a   
 
 
-
 
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