Gene BamMC406_5922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_5922 
Symbol 
ID6182283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010557 
Strand
Start bp463257 
End bp463565 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content66% 
IMG OID641689053 
Producthistone family protein nucleoid-structuring protein H-NS 
Protein accessionYP_001815912 
Protein GI172065200 
COG category[R] General function prediction only 
COG ID[COG2916] DNA-binding protein H-NS 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.997127 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.678214 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGGTT ATCGCGAATT GAAGGCGCAA GCCGATGAAT TGATGAGGCG CGTCGAGGAA 
GCGCGGCTCG CCGAACTCGA CGCCGTCATC GACGAGATTC GCAGCCGAGT CGCCGAATAC
GGCCTGACCG CCGGACAGAT CTTCGGCCGC CATGGCGGCA CCGCAAAAGC GACGCCGCGC
CCGAGCGGAT CGGCGCCCAG GTATCGTGAT CCGAAGACCG GTGCGACGTG GAGCGGACGC
GGTCGCGAGC CGCGCTGGAT CAAAGGCGGC CGTCGCGAGC GGTTCCTGAT CGAGCGCAAT
GCCGGTTGA
 
Protein sequence
MSGYRELKAQ ADELMRRVEE ARLAELDAVI DEIRSRVAEY GLTAGQIFGR HGGTAKATPR 
PSGSAPRYRD PKTGATWSGR GREPRWIKGG RRERFLIERN AG