| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_5158 |
|---|
| Symbol | |
|---|
| ID | 8007738 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012849 |
|---|
| Strand | - |
|---|
| Start bp | 56482 |
|---|
| End bp | 56775 |
|---|
| Gene Length | 294 bp |
|---|
| Protein Length | 97 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644822370 |
|---|
| Product | histone family protein nucleoid-structuring protein H-NS |
|---|
| Protein accession | YP_002973630 |
|---|
| Protein GI | 241114155 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2916] DNA-binding protein H-NS |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.521264 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.418842 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCAACGT ACAAACAGCT TCTGGCGCAA AAAGCTAAGT TGGATTTGCA GATCGAGGCG
GCACACCTCG CCGAAAAAGC AGCGGCGATT GCGCGGGCTC GCGAGATCGT GGAAGCGTAC
GGTCTGACCG CAGCAGATAT CGGCCTCAAG GCTCGCGCCG GCAAGAGTGA ACAAGCCAAA
TCGATCGTGC CGCCCAAGTA TCGGGACCCG AAGACGGGCG CTACCTGGTC GGGCCGCGGC
AGGGCGCCTG CATGGATTGG CAAGAATCGC GATCGATTCC TGATCGAAGC GTGA
|
|---|
| Protein sequence | MATYKQLLAQ KAKLDLQIEA AHLAEKAAAI ARAREIVEAY GLTAADIGLK ARAGKSEQAK
SIVPPKYRDP KTGATWSGRG RAPAWIGKNR DRFLIEA
|
|---|
| |