Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3721 |
Symbol | |
ID | 8021408 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | - |
Start bp | 275636 |
End bp | 275926 |
Gene Length | 291 bp |
Protein Length | 96 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644832511 |
Product | histone family protein nucleoid-structuring protein H-NS |
Protein accession | YP_002983652 |
Protein GI | 241665293 |
COG category | [R] General function prediction only |
COG ID | [COG2916] DNA-binding protein H-NS |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00112888 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.513312 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGACAT ACAAGGAATT GATTGCCCAA AAGGCCAAGT TGGAAGAACA GATCGAAACC GCTCGCGCCA AAGAGCTGGA AACCGTGATC CAGCAAGTGC GCCAGACGGT TGCCGAATAT GGCCTGACGG TTGAAGACCT GGGCTTGGCG CCGCGTCGCG GTCGCCGTGC CGGTGCCAAG GCGCCGGTCC CTCCCAAGTA TCGCGATCCG AAGACAGGTG CAACATGGTC GGGTCGCGGC CGTGCGCCGG CCTGGATCGG CAAGAATCGC GACAAGTTCC TGATCGCCTG A
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Protein sequence | MATYKELIAQ KAKLEEQIET ARAKELETVI QQVRQTVAEY GLTVEDLGLA PRRGRRAGAK APVPPKYRDP KTGATWSGRG RAPAWIGKNR DKFLIA
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