Gene Rmet_5562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmet_5562 
Symbol 
ID4042423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCupriavidus metallidurans CH34 
KingdomBacteria 
Replicon accessionNC_007974 
Strand
Start bp2315252 
End bp2315566 
Gene Length315 bp 
Protein Length104 aa 
Translation table11 
GC content60% 
IMG OID637980980 
Producthistone-like nucleoid-structuring protein H-NS 
Protein accessionYP_587690 
Protein GI94314481 
COG category[R] General function prediction only 
COG ID[COG2916] DNA-binding protein H-NS 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones61 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACCT ACAAGCAACT GCTCGCCCAA AAGGAAGCAC TGGAAGCTCA ACTCGCCGAA 
GTCCGTGCCA CTGAAGTGGC TGGCGTCATT GAGCAGATCC GCACTCTGAT GGAGCAATAC
GGCTTGTCCG TCGAAGACAT CCAAGGCAAG CGCCGTCGCG GTCGACCCGC CGGAGGCGGC
GTTGCTAAGG CAGCCAAGGA ACCGTTGCCT CCAAAGTATC GCGACCCGAA GACCGGTAAG
ACCTGGTCGG GCCGGGGTAG GGCGCCGGCA TGGTTGGGCA AGAACCCGAA TCGGTTCTTG
GTTGCCGAAG AATAA
 
Protein sequence
MATYKQLLAQ KEALEAQLAE VRATEVAGVI EQIRTLMEQY GLSVEDIQGK RRRGRPAGGG 
VAKAAKEPLP PKYRDPKTGK TWSGRGRAPA WLGKNPNRFL VAEE