228 homologs were found in PanDaTox collection
for query gene BamMC406_6777 on replicon NC_010553
Organism: Burkholderia ambifaria MC40-6



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010553  BamMC406_6777  histone family protein nucleoid-structuring protein H-NS  100 
 
 
99 aa  199  9.999999999999999e-51  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_009074  BURPS668_1601  putative DNA-binding protein  52.17 
 
 
93 aa  105  3e-22  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_006348  BMA0864  H-NS histone family protein  52.17 
 
 
93 aa  105  3e-22  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_0668  H-NS histone family protein  52.17 
 
 
93 aa  105  3e-22  Burkholderia mallei NCTC 10247  Bacteria  normal  0.0958724  n/a   
 
 
-
 
NC_007434  BURPS1710b_1784  H-NS histone family protein  52.17 
 
 
93 aa  105  3e-22  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A0489  H-NS histone family protein  52.17 
 
 
93 aa  105  3e-22  Burkholderia mallei NCTC 10229  Bacteria  normal  0.416523  n/a   
 
 
-
 
NC_009076  BURPS1106A_1623  H-NS histone family protein  52.17 
 
 
93 aa  105  3e-22  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I2686  H-NS histone family protein  52.17 
 
 
93 aa  105  3e-22  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1386  H-NS histone family protein  52.17 
 
 
93 aa  105  3e-22  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_010678  Rpic_4798  histone family protein nucleoid-structuring protein H-NS  50 
 
 
96 aa  93.6  8e-19  Ralstonia pickettii 12J  Bacteria  normal  0.272454  normal  0.166506 
 
 
-
 
NC_012857  Rpic12D_3721  histone family protein nucleoid-structuring protein H-NS  50 
 
 
96 aa  93.6  8e-19  Ralstonia pickettii 12D  Bacteria  decreased coverage  0.00112888  normal  0.513312 
 
 
-
 
NC_010002  Daci_1913  histone family protein nucleoid-structuring protein H-NS  41.49 
 
 
95 aa  92  2e-18  Delftia acidovorans SPH-1  Bacteria  normal  hitchhiker  0.00000000183319 
 
 
-
 
NC_010002  Daci_4128  histone family protein nucleoid-structuring protein H-NS  41.49 
 
 
95 aa  92  2e-18  Delftia acidovorans SPH-1  Bacteria  normal  0.382519  hitchhiker  0.00000000510411 
 
 
-
 
NC_010622  Bphy_0116  histone family protein nucleoid-structuring protein H-NS  45.92 
 
 
100 aa  91.7  3e-18  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_008391  Bamb_3595  histone family protein nucleoid-structuring protein H-NS  51.06 
 
 
95 aa  90.9  5e-18  Burkholderia ambifaria AMMD  Bacteria  normal  0.137974  normal 
 
 
-
 
NC_010508  Bcenmc03_0263  histone family protein nucleoid-structuring protein H-NS  46.94 
 
 
97 aa  90.1  9e-18  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.820493 
 
 
-
 
NC_008060  Bcen_2825  histone-like nucleoid-structuring protein H-NS  46.94 
 
 
97 aa  90.1  9e-18  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_0281  histone family protein nucleoid-structuring protein H-NS  46.94 
 
 
97 aa  90.1  9e-18  Burkholderia cenocepacia HI2424  Bacteria  normal  0.166699  n/a   
 
 
-
 
NC_003296  RS02004  putative HNS-like transcription regulator protein  46.88 
 
 
95 aa  88.6  2e-17  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0969964  normal 
 
 
-
 
NC_010084  Bmul_0190  histone family protein nucleoid-structuring protein H-NS  46.94 
 
 
97 aa  89.4  2e-17  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.317548  hitchhiker  0.0000000190695 
 
 
-
 
NC_007510  Bcep18194_A3384  histone-like nucleoid-structuring protein H-NS  45.92 
 
 
97 aa  89  2e-17  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B1833  histone-like nucleoid-structuring protein H-NS  49.48 
 
 
96 aa  89  2e-17  Burkholderia sp. 383  Bacteria  normal  0.648369  normal  0.932582 
 
 
-
 
NC_010551  BamMC406_0209  histone family protein nucleoid-structuring protein H-NS  45.92 
 
 
97 aa  89  2e-17  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.726678 
 
 
-
 
NC_008390  Bamb_0195  histone family protein nucleoid-structuring protein H-NS  45.92 
 
 
97 aa  89  2e-17  Burkholderia ambifaria AMMD  Bacteria  normal  0.750004  n/a   
 
 
-
 
NC_010552  BamMC406_4070  histone family protein nucleoid-structuring protein H-NS  50 
 
 
95 aa  89.4  2e-17  Burkholderia ambifaria MC40-6  Bacteria  decreased coverage  0.000676326  normal 
 
 
-
 
NC_008752  Aave_2580  histone family protein nucleoid-structuring protein H-NS  44.44 
 
 
119 aa  88.6  3e-17  Acidovorax citrulli AAC00-1  Bacteria  normal  0.122678  normal  0.024514 
 
 
-
 
NC_010002  Daci_3934  histone family protein nucleoid-structuring protein H-NS  47.25 
 
 
91 aa  88.6  3e-17  Delftia acidovorans SPH-1  Bacteria  normal  0.222409  normal  0.184824 
 
 
-
 
NC_003296  RS00711  putative HNS-like transcription regulator protein  47.96 
 
 
96 aa  87.8  4e-17  Ralstonia solanacearum GMI1000  Bacteria  hitchhiker  0.0000172984  normal 
 
 
-
 
NC_006348  BMA2905  H-NS histone family protein  45.36 
 
 
97 aa  87.8  4e-17  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_2965  H-NS histone family protein  45.36 
 
 
97 aa  87.8  4e-17  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_0048  H-NS histone family protein  45.36 
 
 
125 aa  87.8  4e-17  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_010679  Bphyt_7403  histone family protein nucleoid-structuring protein H-NS  44.44 
 
 
96 aa  88.2  4e-17  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I3155  H-NS histone family protein  45.36 
 
 
97 aa  87.8  4e-17  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A1636  H-NS histone family protein  45.36 
 
 
97 aa  87.8  4e-17  Burkholderia mallei NCTC 10229  Bacteria  normal  0.741416  n/a   
 
 
-
 
NC_009076  BURPS1106A_3909  H-NS histone family protein  45.36 
 
 
97 aa  87.8  4e-17  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_009074  BURPS668_3827  H-NS histone family protein  45.36 
 
 
97 aa  87.8  4e-17  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_0398  histone family protein nucleoid-structuring protein H-NS  45.92 
 
 
100 aa  87.8  4e-17  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_008785  BMASAVP1_A3404  H-NS histone family protein  45.36 
 
 
97 aa  87.8  4e-17  Burkholderia mallei SAVP1  Bacteria  normal  0.237819  n/a   
 
 
-
 
NC_007951  Bxe_A4321  putative HNS-like transcriptional regulator  45.92 
 
 
100 aa  87  7e-17  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_2158  histone family protein nucleoid-structuring protein H-NS  40.62 
 
 
96 aa  86.3  1e-16  Delftia acidovorans SPH-1  Bacteria  normal  0.232102  normal  0.811955 
 
 
-
 
NC_009379  Pnuc_0838  histone family protein nucleoid-structuring protein H-NS  41.49 
 
 
94 aa  86.3  1e-16  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_3717  histone family protein nucleoid-structuring protein H-NS  43.33 
 
 
136 aa  84.7  3e-16  Delftia acidovorans SPH-1  Bacteria  normal  0.989758  hitchhiker  0.00118334 
 
 
-
 
NC_010002  Daci_1710  histone family protein nucleoid-structuring protein H-NS  46.74 
 
 
93 aa  84.7  4e-16  Delftia acidovorans SPH-1  Bacteria  normal  0.443687  normal  0.618525 
 
 
-
 
NC_010512  Bcenmc03_6929  histone family protein nucleoid-structuring protein H-NS  44.33 
 
 
99 aa  83.6  9e-16  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.599841  normal 
 
 
-
 
NC_011662  Tmz1t_2060  histone family protein nucleoid-structuring protein H-NS  43.48 
 
 
91 aa  83.6  9e-16  Thauera sp. MZ1T  Bacteria  normal  0.0796579  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1570  H-NS histone family protein  44.33 
 
 
173 aa  81.6  0.000000000000003  Burkholderia pseudomallei 1710b  Bacteria  unclonable  0.000000000103893  n/a   
 
 
-
 
NC_007650  BTH_II1558  H-NS histone family protein  44.79 
 
 
131 aa  82  0.000000000000003  Burkholderia thailandensis E264  Bacteria  normal  0.752713  n/a   
 
 
-
 
NC_006349  BMAA0068  H-NS histone family protein  44.33 
 
 
99 aa  81.3  0.000000000000004  Burkholderia mallei ATCC 23344  Bacteria  unclonable  0.00000000181219  n/a   
 
 
-
 
NC_009075  BURPS668_A0098  H-NS histone family protein  44.33 
 
 
108 aa  81.3  0.000000000000004  Burkholderia pseudomallei 668  Bacteria  unclonable  0.00000000000000405362  n/a   
 
 
-
 
NC_008835  BMA10229_1506  H-NS histone family protein  44.33 
 
 
108 aa  81.3  0.000000000000004  Burkholderia mallei NCTC 10229  Bacteria  unclonable  0.00000000000000220305  n/a   
 
 
-
 
NC_009078  BURPS1106A_A0079  H-NS histone family protein  44.33 
 
 
108 aa  81.3  0.000000000000004  Burkholderia pseudomallei 1106a  Bacteria  unclonable  0.0000151227  n/a   
 
 
-
 
NC_008784  BMASAVP1_1225  H-NS histone family protein  44.33 
 
 
99 aa  81.3  0.000000000000004  Burkholderia mallei SAVP1  Bacteria  decreased coverage  0.000000000000571024  n/a   
 
 
-
 
NC_008061  Bcen_3154  histone-like nucleoid-structuring protein H-NS  42.86 
 
 
100 aa  80.9  0.000000000000005  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008543  Bcen2424_5214  histone family protein nucleoid-structuring protein H-NS  42.86 
 
 
100 aa  80.9  0.000000000000005  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.319749 
 
 
-
 
NC_010515  Bcenmc03_5060  histone family protein nucleoid-structuring protein H-NS  42.86 
 
 
100 aa  80.9  0.000000000000005  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_4465  histone family protein nucleoid-structuring protein H-NS  42.39 
 
 
92 aa  80.5  0.000000000000006  Delftia acidovorans SPH-1  Bacteria  normal  0.695514  normal  0.126063 
 
 
-
 
NC_010002  Daci_3476  histone family protein nucleoid-structuring protein H-NS  39.78 
 
 
97 aa  80.5  0.000000000000007  Delftia acidovorans SPH-1  Bacteria  normal  0.634664  normal 
 
 
-
 
NC_008392  Bamb_6382  histone family protein nucleoid-structuring protein H-NS  43.3 
 
 
99 aa  80.5  0.000000000000007  Burkholderia ambifaria AMMD  Bacteria  normal  0.193522  normal  0.0275568 
 
 
-
 
NC_008752  Aave_1150  histone family protein nucleoid-structuring protein H-NS  38.3 
 
 
99 aa  80.5  0.000000000000007  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B1226  histone-like nucleoid-structuring protein H-NS  39.58 
 
 
114 aa  80.5  0.000000000000008  Burkholderia sp. 383  Bacteria  normal  0.204671  normal 
 
 
-
 
NC_010557  BamMC406_6084  histone family protein nucleoid-structuring protein H-NS  43.3 
 
 
99 aa  80.5  0.000000000000008  Burkholderia ambifaria MC40-6  Bacteria  normal  0.78955  normal 
 
 
-
 
NC_003295  RSc0867  putative HNS-like transcription regulator protein  40.82 
 
 
96 aa  79.7  0.00000000000001  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.139885 
 
 
-
 
NC_010087  Bmul_5767  histone family protein nucleoid-structuring protein H-NS  45.36 
 
 
99 aa  79.7  0.00000000000001  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007651  BTH_I2714  DNA-binding protein BprA  41.24 
 
 
111 aa  79.3  0.00000000000001  Burkholderia thailandensis E264  Bacteria  normal  0.344106  n/a   
 
 
-
 
NC_010002  Daci_1968  histone family protein nucleoid-structuring protein H-NS  39.33 
 
 
93 aa  79.7  0.00000000000001  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_6934  histone family protein nucleoid-structuring protein H-NS  42.55 
 
 
96 aa  79  0.00000000000002  Burkholderia phytofirmans PsJN  Bacteria  normal  0.909068  normal 
 
 
-
 
NC_007509  Bcep18194_C6596  histone-like nucleoid-structuring protein H-NS  43.62 
 
 
96 aa  79  0.00000000000002  Burkholderia sp. 383  Bacteria  normal  0.540075  normal 
 
 
-
 
NC_007650  BTH_II0088  DNA-binding protein BprA  42.57 
 
 
101 aa  78.6  0.00000000000002  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I3224  DNA-binding protein BprA  42.57 
 
 
101 aa  78.6  0.00000000000002  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_007336  Reut_C6005  histone-like nucleoid-structuring protein H-NS  36 
 
 
103 aa  77.8  0.00000000000004  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0208  H-NS histone family protein  43.56 
 
 
101 aa  78.2  0.00000000000004  Burkholderia pseudomallei 1710b  Bacteria  hitchhiker  0.00707733  n/a   
 
 
-
 
NC_007974  Rmet_5562  histone-like nucleoid-structuring protein H-NS  37.86 
 
 
104 aa  78.2  0.00000000000004  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_009075  BURPS668_A0126  H-NS histone family protein  43.56 
 
 
101 aa  77.8  0.00000000000004  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1616  H-NS histone family protein  43.56 
 
 
101 aa  78.2  0.00000000000004  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007509  Bcep18194_C7449  histone-like nucleoid-structuring protein H-NS  48.45 
 
 
99 aa  77.4  0.00000000000006  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010681  Bphyt_0265  histone family protein nucleoid-structuring protein H-NS  39.22 
 
 
98 aa  77.4  0.00000000000006  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_1065  histone family protein nucleoid-structuring protein H-NS  37.89 
 
 
98 aa  77  0.00000000000008  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_4633  histone family protein nucleoid-structuring protein H-NS  44.9 
 
 
101 aa  77  0.00000000000008  Burkholderia cenocepacia MC0-3  Bacteria  unclonable  0.000000000000292632  decreased coverage  0.0000243295 
 
 
-
 
NC_009078  BURPS1106A_A0099  H-NS histone family protein  42.57 
 
 
101 aa  77  0.00000000000008  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_1144  histone family protein nucleoid-structuring protein H-NS  37.89 
 
 
98 aa  77  0.00000000000008  Acidovorax sp. JS42  Bacteria  normal  0.439674  normal  0.582774 
 
 
-
 
NC_007650  BTH_II0843  DNA-binding protein BprA  43.16 
 
 
96 aa  77  0.00000000000009  Burkholderia thailandensis E264  Bacteria  normal  0.277711  n/a   
 
 
-
 
NC_009075  BURPS668_A1247  H-NS histone family protein  43.75 
 
 
96 aa  76.3  0.0000000000001  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_006349  BMAA0720  H-NS histone family protein  43.75 
 
 
96 aa  76.3  0.0000000000001  Burkholderia mallei ATCC 23344  Bacteria  normal  0.232457  n/a   
 
 
-
 
NC_009079  BMA10247_A1706  H-NS histone family protein  43.75 
 
 
104 aa  76.6  0.0000000000001  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A2442  H-NS histone family protein  43.75 
 
 
131 aa  76.3  0.0000000000001  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A1174  H-NS histone family protein  43.75 
 
 
104 aa  76.6  0.0000000000001  Burkholderia pseudomallei 1106a  Bacteria  normal  0.354816  n/a   
 
 
-
 
NC_007952  Bxe_B2975  putative H-NS-like transcription regulator  41.49 
 
 
96 aa  76.3  0.0000000000001  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008835  BMA10229_0742  H-NS histone family protein  43.75 
 
 
104 aa  76.6  0.0000000000001  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_3939  histone-like nucleoid-structuring protein H-NS  40.21 
 
 
99 aa  76.6  0.0000000000001  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.0681504  hitchhiker  0.000514453 
 
 
-
 
NC_010512  Bcenmc03_6525  histone family protein nucleoid-structuring protein H-NS  47.42 
 
 
99 aa  75.9  0.0000000000002  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.381726 
 
 
-
 
NC_008062  Bcen_5671  histone-like nucleoid-structuring protein H-NS  47.42 
 
 
99 aa  75.9  0.0000000000002  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008544  Bcen2424_6035  histone family protein nucleoid-structuring protein H-NS  47.42 
 
 
99 aa  75.9  0.0000000000002  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.401704 
 
 
-
 
NC_010002  Daci_4071  histone family protein nucleoid-structuring protein H-NS  41.94 
 
 
95 aa  75.1  0.0000000000003  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.0737815 
 
 
-
 
NC_010002  Daci_4714  histone family protein nucleoid-structuring protein H-NS  35.42 
 
 
98 aa  74.3  0.0000000000005  Delftia acidovorans SPH-1  Bacteria  normal  0.991534  normal  0.729946 
 
 
-
 
NC_009078  BURPS1106A_A2072  H-NS histone family protein  40 
 
 
96 aa  73.9  0.0000000000006  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_010623  Bphy_4285  histone family protein nucleoid-structuring protein H-NS  37.5 
 
 
97 aa  74.3  0.0000000000006  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_008392  Bamb_6191  histone family protein nucleoid-structuring protein H-NS  44.33 
 
 
102 aa  73.9  0.0000000000006  Burkholderia ambifaria AMMD  Bacteria  normal  0.299615  normal 
 
 
-
 
NC_006349  BMAA1529  DNA-binding protein BprA  40 
 
 
96 aa  73.9  0.0000000000007  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A2160  DNA-binding protein BprA  40 
 
 
96 aa  73.9  0.0000000000007  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_010557  BamMC406_5922  histone family protein nucleoid-structuring protein H-NS  44.33 
 
 
102 aa  73.6  0.0000000000008  Burkholderia ambifaria MC40-6  Bacteria  normal  0.997127  normal  0.678214 
 
 
-
 
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