Gene Daci_1710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_1710 
Symbol 
ID5747268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp1901705 
End bp1901986 
Gene Length282 bp 
Protein Length93 aa 
Translation table11 
GC content59% 
IMG OID641296791 
Producthistone family protein nucleoid-structuring protein H-NS 
Protein accessionYP_001562738 
Protein GI160897156 
COG category[R] General function prediction only 
COG ID[COG2916] DNA-binding protein H-NS 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.443687 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value0.618525 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATCCG ATTACAAGAC ACTTCTTCAG CAGAAGGCTG AACTTGAAGC CAAGATTGCC 
CACGCTCTGG CCACAGAAAA GTCTGGCGTG GTCGCCCGCG TGCGCAGCCT GATCGAGGAA
TTCCACCTGA CTCCAGACGA TGTGTTCGGA GGCTCCAAAC GCAAAGCTTC GGCTGGCGCG
GCCAAGTACC GCGATCCTGG TACCGGCGCT ACGTGGACGG GGCGTGGCAA GCCGCCCAAC
TGGATCAAGG ATGCTGCGGA TCGGACCTCT TTCGAGATCT GA
 
Protein sequence
MTSDYKTLLQ QKAELEAKIA HALATEKSGV VARVRSLIEE FHLTPDDVFG GSKRKASAGA 
AKYRDPGTGA TWTGRGKPPN WIKDAADRTS FEI