218 homologs were found in PanDaTox collection
for query gene Daci_4071 on replicon NC_010002
Organism: Delftia acidovorans SPH-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010002  Daci_4071  histone family protein nucleoid-structuring protein H-NS  100 
 
 
95 aa  192  2e-48  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.0737815 
 
 
-
 
NC_010002  Daci_1968  histone family protein nucleoid-structuring protein H-NS  73.68 
 
 
93 aa  136  1e-31  Delftia acidovorans SPH-1  Bacteria  normal  normal 
 
 
-
 
NC_010002  Daci_1710  histone family protein nucleoid-structuring protein H-NS  67.37 
 
 
93 aa  135  2e-31  Delftia acidovorans SPH-1  Bacteria  normal  0.443687  normal  0.618525 
 
 
-
 
NC_010002  Daci_3476  histone family protein nucleoid-structuring protein H-NS  64.29 
 
 
97 aa  119  9.999999999999999e-27  Delftia acidovorans SPH-1  Bacteria  normal  0.634664  normal 
 
 
-
 
NC_010002  Daci_4714  histone family protein nucleoid-structuring protein H-NS  51.52 
 
 
98 aa  98.2  3e-20  Delftia acidovorans SPH-1  Bacteria  normal  0.991534  normal  0.729946 
 
 
-
 
NC_010002  Daci_1913  histone family protein nucleoid-structuring protein H-NS  54.35 
 
 
95 aa  94.7  4e-19  Delftia acidovorans SPH-1  Bacteria  normal  hitchhiker  0.00000000183319 
 
 
-
 
NC_010002  Daci_4128  histone family protein nucleoid-structuring protein H-NS  54.35 
 
 
95 aa  94.7  4e-19  Delftia acidovorans SPH-1  Bacteria  normal  0.382519  hitchhiker  0.00000000510411 
 
 
-
 
NC_011992  Dtpsy_1065  histone family protein nucleoid-structuring protein H-NS  50.51 
 
 
98 aa  90.5  8e-18  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008782  Ajs_1144  histone family protein nucleoid-structuring protein H-NS  50.51 
 
 
98 aa  90.5  8e-18  Acidovorax sp. JS42  Bacteria  normal  0.439674  normal  0.582774 
 
 
-
 
NC_010002  Daci_3934  histone family protein nucleoid-structuring protein H-NS  50.53 
 
 
91 aa  89  2e-17  Delftia acidovorans SPH-1  Bacteria  normal  0.222409  normal  0.184824 
 
 
-
 
NC_010002  Daci_2158  histone family protein nucleoid-structuring protein H-NS  50 
 
 
96 aa  86.7  9e-17  Delftia acidovorans SPH-1  Bacteria  normal  0.232102  normal  0.811955 
 
 
-
 
NC_008752  Aave_1150  histone family protein nucleoid-structuring protein H-NS  47.42 
 
 
99 aa  85.9  2e-16  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_009379  Pnuc_0838  histone family protein nucleoid-structuring protein H-NS  48.39 
 
 
94 aa  83.6  9e-16  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc0867  putative HNS-like transcription regulator protein  48.31 
 
 
96 aa  81.3  0.000000000000004  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.139885 
 
 
-
 
NC_010002  Daci_3717  histone family protein nucleoid-structuring protein H-NS  48.42 
 
 
136 aa  79  0.00000000000002  Delftia acidovorans SPH-1  Bacteria  normal  0.989758  hitchhiker  0.00118334 
 
 
-
 
NC_007511  Bcep18194_B1833  histone-like nucleoid-structuring protein H-NS  47.83 
 
 
96 aa  75.5  0.0000000000002  Burkholderia sp. 383  Bacteria  normal  0.648369  normal  0.932582 
 
 
-
 
NC_010553  BamMC406_6777  histone family protein nucleoid-structuring protein H-NS  41.94 
 
 
99 aa  75.1  0.0000000000003  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_003296  RS02004  putative HNS-like transcription regulator protein  43.18 
 
 
95 aa  74.3  0.0000000000005  Ralstonia solanacearum GMI1000  Bacteria  normal  0.0969964  normal 
 
 
-
 
NC_003296  RS00711  putative HNS-like transcription regulator protein  45.05 
 
 
96 aa  73.6  0.0000000000008  Ralstonia solanacearum GMI1000  Bacteria  hitchhiker  0.0000172984  normal 
 
 
-
 
NC_010002  Daci_4465  histone family protein nucleoid-structuring protein H-NS  44.68 
 
 
92 aa  73.9  0.0000000000008  Delftia acidovorans SPH-1  Bacteria  normal  0.695514  normal  0.126063 
 
 
-
 
NC_007974  Rmet_4935  putative H-NS histon-like DNA-binding protein  40.59 
 
 
104 aa  73.2  0.000000000001  Cupriavidus metallidurans CH34  Bacteria  normal  0.529231  normal  0.833407 
 
 
-
 
NC_011662  Tmz1t_2060  histone family protein nucleoid-structuring protein H-NS  44.32 
 
 
91 aa  72.4  0.000000000002  Thauera sp. MZ1T  Bacteria  normal  0.0796579  n/a   
 
 
-
 
NC_007336  Reut_C6005  histone-like nucleoid-structuring protein H-NS  39.36 
 
 
103 aa  72  0.000000000003  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010512  Bcenmc03_6929  histone family protein nucleoid-structuring protein H-NS  40.43 
 
 
99 aa  71.6  0.000000000003  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.599841  normal 
 
 
-
 
NC_010086  Bmul_3806  histone family protein nucleoid-structuring protein H-NS  38.54 
 
 
100 aa  71.6  0.000000000004  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0101066  hitchhiker  0.00273603 
 
 
-
 
NC_007974  Rmet_5562  histone-like nucleoid-structuring protein H-NS  44.21 
 
 
104 aa  70.9  0.000000000005  Cupriavidus metallidurans CH34  Bacteria  normal  normal 
 
 
-
 
NC_008391  Bamb_3595  histone family protein nucleoid-structuring protein H-NS  43.48 
 
 
95 aa  70.1  0.000000000009  Burkholderia ambifaria AMMD  Bacteria  normal  0.137974  normal 
 
 
-
 
NC_010552  BamMC406_4070  histone family protein nucleoid-structuring protein H-NS  43.48 
 
 
95 aa  70.1  0.000000000009  Burkholderia ambifaria MC40-6  Bacteria  decreased coverage  0.000676326  normal 
 
 
-
 
NC_006348  BMA0864  H-NS histone family protein  38.2 
 
 
93 aa  68.9  0.00000000002  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_1784  H-NS histone family protein  38.2 
 
 
93 aa  68.9  0.00000000002  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_008836  BMA10229_A0489  H-NS histone family protein  38.2 
 
 
93 aa  68.9  0.00000000002  Burkholderia mallei NCTC 10229  Bacteria  normal  0.416523  n/a   
 
 
-
 
NC_010678  Rpic_4798  histone family protein nucleoid-structuring protein H-NS  43.82 
 
 
96 aa  68.9  0.00000000002  Ralstonia pickettii 12J  Bacteria  normal  0.272454  normal  0.166506 
 
 
-
 
NC_009080  BMA10247_0668  H-NS histone family protein  38.2 
 
 
93 aa  68.9  0.00000000002  Burkholderia mallei NCTC 10247  Bacteria  normal  0.0958724  n/a   
 
 
-
 
NC_012857  Rpic12D_3721  histone family protein nucleoid-structuring protein H-NS  43.82 
 
 
96 aa  68.9  0.00000000002  Ralstonia pickettii 12D  Bacteria  decreased coverage  0.00112888  normal  0.513312 
 
 
-
 
NC_007651  BTH_I2686  H-NS histone family protein  38.2 
 
 
93 aa  68.9  0.00000000002  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_1623  H-NS histone family protein  38.2 
 
 
93 aa  68.9  0.00000000002  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_008392  Bamb_6382  histone family protein nucleoid-structuring protein H-NS  45.16 
 
 
99 aa  69.3  0.00000000002  Burkholderia ambifaria AMMD  Bacteria  normal  0.193522  normal  0.0275568 
 
 
-
 
NC_009074  BURPS668_1601  putative DNA-binding protein  38.2 
 
 
93 aa  68.9  0.00000000002  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008785  BMASAVP1_A1386  H-NS histone family protein  38.2 
 
 
93 aa  68.9  0.00000000002  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_007509  Bcep18194_C6596  histone-like nucleoid-structuring protein H-NS  43.66 
 
 
96 aa  68.2  0.00000000003  Burkholderia sp. 383  Bacteria  normal  0.540075  normal 
 
 
-
 
NC_010557  BamMC406_6084  histone family protein nucleoid-structuring protein H-NS  45.16 
 
 
99 aa  68.6  0.00000000003  Burkholderia ambifaria MC40-6  Bacteria  normal  0.78955  normal 
 
 
-
 
NC_010512  Bcenmc03_6525  histone family protein nucleoid-structuring protein H-NS  47.06 
 
 
99 aa  67.8  0.00000000005  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal  0.381726 
 
 
-
 
NC_008062  Bcen_5671  histone-like nucleoid-structuring protein H-NS  47.06 
 
 
99 aa  67.8  0.00000000005  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008544  Bcen2424_6035  histone family protein nucleoid-structuring protein H-NS  47.06 
 
 
99 aa  67.8  0.00000000005  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.401704 
 
 
-
 
NC_010553  BamMC406_6696  histone family protein nucleoid-structuring protein H-NS  45.33 
 
 
98 aa  67.4  0.00000000006  Burkholderia ambifaria MC40-6  Bacteria  normal  0.685774  normal  0.68943 
 
 
-
 
NC_012855  Rpic12D_4689  histone family protein nucleoid-structuring protein H-NS  43.37 
 
 
92 aa  67.4  0.00000000006  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B4990  histone-like nucleoid-structuring protein H-NS  36 
 
 
104 aa  67.4  0.00000000006  Ralstonia eutropha JMP134  Bacteria  normal  0.0212879  n/a   
 
 
-
 
NC_009074  BURPS668_2135  putative DNA-binding protein  51.52 
 
 
79 aa  67.4  0.00000000006  Burkholderia pseudomallei 668  Bacteria  normal  0.45202  n/a   
 
 
-
 
NC_008061  Bcen_3154  histone-like nucleoid-structuring protein H-NS  40.62 
 
 
100 aa  67.4  0.00000000007  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010515  Bcenmc03_5060  histone family protein nucleoid-structuring protein H-NS  40.62 
 
 
100 aa  67.4  0.00000000007  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008543  Bcen2424_5214  histone family protein nucleoid-structuring protein H-NS  40.62 
 
 
100 aa  67.4  0.00000000007  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.319749 
 
 
-
 
NC_010087  Bmul_5655  histone family protein nucleoid-structuring protein H-NS  45.33 
 
 
128 aa  67  0.00000000008  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007509  Bcep18194_C7449  histone-like nucleoid-structuring protein H-NS  49.23 
 
 
99 aa  67  0.00000000009  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_3850  histone family protein nucleoid-structuring protein H-NS  40.19 
 
 
239 aa  66.2  0.0000000001  Burkholderia phymatum STM815  Bacteria  decreased coverage  0.000396096  normal  0.523489 
 
 
-
 
NC_010087  Bmul_5767  histone family protein nucleoid-structuring protein H-NS  37.5 
 
 
99 aa  66.2  0.0000000001  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_2580  histone family protein nucleoid-structuring protein H-NS  45.05 
 
 
119 aa  66.6  0.0000000001  Acidovorax citrulli AAC00-1  Bacteria  normal  0.122678  normal  0.024514 
 
 
-
 
NC_007509  Bcep18194_C7383  histone-like nucleoid-structuring protein H-NS  42.35 
 
 
102 aa  64.3  0.0000000005  Burkholderia sp. 383  Bacteria  normal  normal  0.907507 
 
 
-
 
NC_010679  Bphyt_7403  histone family protein nucleoid-structuring protein H-NS  37.63 
 
 
96 aa  64.3  0.0000000005  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010625  Bphy_6772  histone family protein nucleoid-structuring protein H-NS  37.89 
 
 
254 aa  63.9  0.0000000006  Burkholderia phymatum STM815  Bacteria  decreased coverage  0.000000111168  normal  0.0541472 
 
 
-
 
NC_007650  BTH_II0199  H-NS histone family protein  37.36 
 
 
97 aa  63.5  0.0000000009  Burkholderia thailandensis E264  Bacteria  normal  0.453548  n/a   
 
 
-
 
NC_010084  Bmul_0158  histone family protein nucleoid-structuring protein H-NS  44.05 
 
 
98 aa  63.2  0.000000001  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_007434  BURPS1710b_2220  H-NS histone family protein  36.84 
 
 
102 aa  63.5  0.000000001  Burkholderia pseudomallei 1710b  Bacteria  normal  0.999721  n/a   
 
 
-
 
NC_010515  Bcenmc03_5567  histone family protein nucleoid-structuring protein H-NS  45.59 
 
 
99 aa  63.2  0.000000001  Burkholderia cenocepacia MC0-3  Bacteria  hitchhiker  0.000568054  normal  0.0551965 
 
 
-
 
NC_007435  BURPS1710b_A1570  H-NS histone family protein  43.82 
 
 
173 aa  62.8  0.000000002  Burkholderia pseudomallei 1710b  Bacteria  unclonable  0.000000000103893  n/a   
 
 
-
 
NC_007650  BTH_II1558  H-NS histone family protein  39.78 
 
 
131 aa  62.8  0.000000002  Burkholderia thailandensis E264  Bacteria  normal  0.752713  n/a   
 
 
-
 
NC_007952  Bxe_B2975  putative H-NS-like transcription regulator  40.48 
 
 
96 aa  62.4  0.000000002  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_009078  BURPS1106A_A0171  H-NS histone family protein  35.16 
 
 
128 aa  61.6  0.000000003  Burkholderia pseudomallei 1106a  Bacteria  normal  0.854986  n/a   
 
 
-
 
NC_009075  BURPS668_A0260  H-NS histone family protein  35.16 
 
 
128 aa  61.6  0.000000003  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_009075  BURPS668_A0098  H-NS histone family protein  43.82 
 
 
108 aa  61.6  0.000000003  Burkholderia pseudomallei 668  Bacteria  unclonable  0.00000000000000405362  n/a   
 
 
-
 
NC_008835  BMA10229_1506  H-NS histone family protein  43.82 
 
 
108 aa  61.6  0.000000003  Burkholderia mallei NCTC 10229  Bacteria  unclonable  0.00000000000000220305  n/a   
 
 
-
 
NC_009078  BURPS1106A_A0079  H-NS histone family protein  43.82 
 
 
108 aa  61.6  0.000000003  Burkholderia pseudomallei 1106a  Bacteria  unclonable  0.0000151227  n/a   
 
 
-
 
NC_009075  BURPS668_A1247  H-NS histone family protein  37.63 
 
 
96 aa  61.2  0.000000004  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_006349  BMAA0068  H-NS histone family protein  45.35 
 
 
99 aa  61.2  0.000000004  Burkholderia mallei ATCC 23344  Bacteria  unclonable  0.00000000181219  n/a   
 
 
-
 
NC_006349  BMAA0720  H-NS histone family protein  37.63 
 
 
96 aa  61.2  0.000000004  Burkholderia mallei ATCC 23344  Bacteria  normal  0.232457  n/a   
 
 
-
 
NC_006349  BMAA1529  DNA-binding protein BprA  56.67 
 
 
96 aa  61.2  0.000000004  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0569  HNS-like transcription regulator protein  56.67 
 
 
100 aa  61.2  0.000000004  Burkholderia pseudomallei 1710b  Bacteria  normal  0.147609  n/a   
 
 
-
 
NC_008835  BMA10229_2075  DNA-binding protein BprA  56.67 
 
 
100 aa  61.2  0.000000004  Burkholderia mallei NCTC 10229  Bacteria  normal  0.0585602  n/a   
 
 
-
 
NC_010676  Bphyt_6934  histone family protein nucleoid-structuring protein H-NS  38.82 
 
 
96 aa  61.2  0.000000004  Burkholderia phytofirmans PsJN  Bacteria  normal  0.909068  normal 
 
 
-
 
NC_009078  BURPS1106A_A1174  H-NS histone family protein  37.63 
 
 
104 aa  61.6  0.000000004  Burkholderia pseudomallei 1106a  Bacteria  normal  0.354816  n/a   
 
 
-
 
NC_009079  BMA10247_A0755  H-NS histone family protein  56.67 
 
 
100 aa  61.2  0.000000004  Burkholderia mallei NCTC 10247  Bacteria  normal  0.0220992  n/a   
 
 
-
 
NC_008392  Bamb_6191  histone family protein nucleoid-structuring protein H-NS  38.82 
 
 
102 aa  61.6  0.000000004  Burkholderia ambifaria AMMD  Bacteria  normal  0.299615  normal 
 
 
-
 
NC_009075  BURPS668_A2160  DNA-binding protein BprA  56.67 
 
 
96 aa  61.2  0.000000004  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_0742  H-NS histone family protein  37.63 
 
 
104 aa  61.6  0.000000004  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_008784  BMASAVP1_1225  H-NS histone family protein  45.35 
 
 
99 aa  61.2  0.000000004  Burkholderia mallei SAVP1  Bacteria  decreased coverage  0.000000000000571024  n/a   
 
 
-
 
NC_009079  BMA10247_A1706  H-NS histone family protein  37.63 
 
 
104 aa  61.6  0.000000004  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1635  H-NS histone family protein  35.16 
 
 
97 aa  61.2  0.000000005  Burkholderia pseudomallei 1710b  Bacteria  normal  0.749854  n/a   
 
 
-
 
NC_007435  BURPS1710b_A2442  H-NS histone family protein  37.63 
 
 
131 aa  61.2  0.000000005  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2072  H-NS histone family protein  56.67 
 
 
96 aa  61.2  0.000000005  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_007651  BTH_I2714  DNA-binding protein BprA  38.04 
 
 
111 aa  60.8  0.000000006  Burkholderia thailandensis E264  Bacteria  normal  0.344106  n/a   
 
 
-
 
NC_010557  BamMC406_5922  histone family protein nucleoid-structuring protein H-NS  38.82 
 
 
102 aa  60.1  0.000000009  Burkholderia ambifaria MC40-6  Bacteria  normal  0.997127  normal  0.678214 
 
 
-
 
NC_008545  Bcen2424_6922  histone family protein nucleoid-structuring protein H-NS  42.22 
 
 
100 aa  60.5  0.000000009  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_3939  histone-like nucleoid-structuring protein H-NS  34.83 
 
 
99 aa  60.1  0.000000009  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.0681504  hitchhiker  0.000514453 
 
 
-
 
NC_007974  Rmet_3677  histone-like nucleoid-structuring protein H-NS  39.77 
 
 
102 aa  60.1  0.00000001  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.166379 
 
 
-
 
NC_010627  Bphy_7383  histone family protein nucleoid-structuring protein H-NS  42.86 
 
 
254 aa  59.3  0.00000002  Burkholderia phymatum STM815  Bacteria  normal  normal  0.160149 
 
 
-
 
NC_010515  Bcenmc03_4633  histone family protein nucleoid-structuring protein H-NS  48.28 
 
 
101 aa  58.9  0.00000002  Burkholderia cenocepacia MC0-3  Bacteria  unclonable  0.000000000000292632  decreased coverage  0.0000243295 
 
 
-
 
NC_010681  Bphyt_0398  histone family protein nucleoid-structuring protein H-NS  34.38 
 
 
100 aa  59.3  0.00000002  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_012849  Rpic12D_5158  histone family protein nucleoid-structuring protein H-NS  46.24 
 
 
97 aa  59.3  0.00000002  Ralstonia pickettii 12D  Bacteria  normal  0.521264  normal  0.418842 
 
 
-
 
NC_007951  Bxe_A4321  putative HNS-like transcriptional regulator  34.38 
 
 
100 aa  58.9  0.00000002  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_2825  histone-like nucleoid-structuring protein H-NS  39.29 
 
 
97 aa  58.9  0.00000002  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_010681  Bphyt_0265  histone family protein nucleoid-structuring protein H-NS  34.38 
 
 
98 aa  58.9  0.00000002  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
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