Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0867 |
Symbol | |
ID | 1219675 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 900716 |
End bp | 901006 |
Gene Length | 291 bp |
Protein Length | 96 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637237229 |
Product | putative HNS-like transcription regulator protein |
Protein accession | NP_518988 |
Protein GI | 17545586 |
COG category | [R] General function prediction only |
COG ID | [COG2916] DNA-binding protein H-NS |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.139885 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACCT ACAAAGACCT GCTTTCGCAA AAAGCAAAAC TCGAAGAACA ACTCGAAGCC GCTCGCCAGA AGGAACTGGC TGAGATCACC GCGCAAGTGC GGCAGGTCGT GCAGGAATAC GGCCTGACCG CCGAGGACAT CGGCCTGGCG CCGAAGCGTG GTGGCAAGCG CGCGCCCAAG GCGGCACCAG TGCCCAAGTA CCGTGATCCC AAGACCGGCG CCACGTGGAC CGGCCGCGGC CGCGCCCCGG CCTGGATCGG CAAGAACCGC GACAAATATC TGATCGCCTG A
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Protein sequence | MATYKDLLSQ KAKLEEQLEA ARQKELAEIT AQVRQVVQEY GLTAEDIGLA PKRGGKRAPK AAPVPKYRDP KTGATWTGRG RAPAWIGKNR DKYLIA
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