Gene Vapar_1795 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_1795 
Symbol 
ID7970812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp1931812 
End bp1932156 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content61% 
IMG OID644792396 
Producthistone family protein nucleoid-structuring protein H-NS 
Protein accessionYP_002943711 
Protein GI239814801 
COG category[R] General function prediction only 
COG ID[COG2916] DNA-binding protein H-NS 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTCGA CCCTTGCCGA TATCAATTCC CAGATCAAGA AGTACGACGA GCAGATTGCG 
CAATTGCGCA AGCAGGCCGA AGACCTTCGC AACCAAGAGC GCGCGGGCGT GATTGAAGAT
GTGCGCCGGA AGATCGCTGA ATACGGCCTG ACTGCGTCGG ACCTGAAACT CAGTGCACGC
GGCGGCTCGG TCAAGCGCAG TGCAGGGGTT CCCGCGGTCA AGGCAGCAGC CAAATACCGT
GGTCCGACCG GAGAAACCTG GTCTGGCGGC CGCGGCCGCA AGCCGCGTTG GGTCACCGAA
GCACTGGCCG CAGGCAAGTC GCTTTCCGAG TTCGAGATCA AGTAA
 
Protein sequence
MASTLADINS QIKKYDEQIA QLRKQAEDLR NQERAGVIED VRRKIAEYGL TASDLKLSAR 
GGSVKRSAGV PAVKAAAKYR GPTGETWSGG RGRKPRWVTE ALAAGKSLSE FEIK