Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_1795 |
Symbol | |
ID | 7970812 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 1931812 |
End bp | 1932156 |
Gene Length | 345 bp |
Protein Length | 114 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644792396 |
Product | histone family protein nucleoid-structuring protein H-NS |
Protein accession | YP_002943711 |
Protein GI | 239814801 |
COG category | [R] General function prediction only |
COG ID | [COG2916] DNA-binding protein H-NS |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTTCGA CCCTTGCCGA TATCAATTCC CAGATCAAGA AGTACGACGA GCAGATTGCG CAATTGCGCA AGCAGGCCGA AGACCTTCGC AACCAAGAGC GCGCGGGCGT GATTGAAGAT GTGCGCCGGA AGATCGCTGA ATACGGCCTG ACTGCGTCGG ACCTGAAACT CAGTGCACGC GGCGGCTCGG TCAAGCGCAG TGCAGGGGTT CCCGCGGTCA AGGCAGCAGC CAAATACCGT GGTCCGACCG GAGAAACCTG GTCTGGCGGC CGCGGCCGCA AGCCGCGTTG GGTCACCGAA GCACTGGCCG CAGGCAAGTC GCTTTCCGAG TTCGAGATCA AGTAA
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Protein sequence | MASTLADINS QIKKYDEQIA QLRKQAEDLR NQERAGVIED VRRKIAEYGL TASDLKLSAR GGSVKRSAGV PAVKAAAKYR GPTGETWSGG RGRKPRWVTE ALAAGKSLSE FEIK
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