| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnap_4886 |
|---|
| Symbol | |
|---|
| ID | 4685669 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas naphthalenivorans CJ2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008759 |
|---|
| Strand | + |
|---|
| Start bp | 60019 |
|---|
| End bp | 60363 |
|---|
| Gene Length | 345 bp |
|---|
| Protein Length | 114 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 639826528 |
|---|
| Product | histone family protein nucleoid-structuring protein H-NS |
|---|
| Protein accession | YP_973692 |
|---|
| Protein GI | 121583256 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2916] DNA-binding protein H-NS |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.602991 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACACAAG CAACCACACT ACAACAGCAA ATCCAGGAAG CCGAGGCTAT CGTCAAGGAA
TTGCGCAAGC AATTGGATGA AGAGCGAAAA GGTGAACGCA TGCAGGCCGT CGCTTCAGCC
AAAGAACTAA TCAAAACCCA CGGGTTGACC GCTGCAGATT TAGGCTTTTC AGGTAAGGGC
TCATCAGCCA AACGTCCAGC CGGTGACAAA CGCGGTGTGG TCGCGGCCAA GTACCAGGAC
CACGAAAGTG GAAAAACCTG GACGGGACGA GGTAAATCTC CTGCCTGGTT GGCGGCGCAG
CTGGCAGCAG GCTACACTAA AGACGACTTT CTTATTAAAA GTTAA
|
|---|
| Protein sequence | MTQATTLQQQ IQEAEAIVKE LRKQLDEERK GERMQAVASA KELIKTHGLT AADLGFSGKG
SSAKRPAGDK RGVVAAKYQD HESGKTWTGR GKSPAWLAAQ LAAGYTKDDF LIKS
|
|---|
| |