44 homologs were found in PanDaTox collection
for query gene Sbal_4021 on replicon NC_009052
Organism: Shewanella baltica OS155



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009052  Sbal_4021  ABC-type amino acid transport/signal transduction system  100 
 
 
241 aa  496  1e-139  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_3921  extracellular solute-binding protein family 3  99.58 
 
 
241 aa  493  9.999999999999999e-139  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_4114  ABC-type amino acid transport/signal transduction system  99.17 
 
 
241 aa  492  9.999999999999999e-139  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_3998  ABC-type amino acid transport/signal transduction system  98.75 
 
 
241 aa  489  1e-137  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_3276  ABC-type amino acid transport/signal transduction system  52.7 
 
 
247 aa  254  1.0000000000000001e-66  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_009439  Pmen_3190  extracellular solute-binding protein  35.32 
 
 
226 aa  156  2e-37  Pseudomonas mendocina ymp  Bacteria  normal  normal  0.0211783 
 
 
-
 
NC_008700  Sama_2915  extracellular solute-binding protein  31.25 
 
 
270 aa  131  6.999999999999999e-30  Shewanella amazonensis SB2B  Bacteria  normal  normal  0.418761 
 
 
-
 
NC_007519  Dde_3620  amino acid ABC transporter periplasmic protein  32.93 
 
 
278 aa  130  2.0000000000000002e-29  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_3307  extracellular solute-binding protein  31.93 
 
 
286 aa  126  3e-28  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_009997  Sbal195_1044  extracellular solute-binding protein  33.47 
 
 
286 aa  123  2e-27  Shewanella baltica OS195  Bacteria  normal  normal  0.523341 
 
 
-
 
NC_009438  Sputcn32_2979  extracellular solute-binding protein  32.22 
 
 
285 aa  123  3e-27  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_1011  extracellular solute-binding protein  33.33 
 
 
285 aa  122  6e-27  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_3146  extracellular solute-binding protein  31.28 
 
 
285 aa  121  9e-27  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_3247  extracellular solute-binding protein  31.82 
 
 
285 aa  120  9.999999999999999e-27  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009052  Sbal_3328  extracellular solute-binding protein  32.64 
 
 
286 aa  120  1.9999999999999998e-26  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008321  Shewmr4_0876  extracellular solute-binding protein  30.86 
 
 
285 aa  120  3e-26  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_003910  CPS_2793  putative amino acid-binding protein  33.8 
 
 
231 aa  119  4.9999999999999996e-26  Colwellia psychrerythraea 34H  Bacteria  normal  0.287982  n/a   
 
 
-
 
NC_011663  Sbal223_1032  extracellular solute-binding protein family 3  32.92 
 
 
285 aa  119  6e-26  Shewanella baltica OS223  Bacteria  normal  normal  0.267396 
 
 
-
 
NC_011138  MADE_03935  ABC-type amino acid transport/signal transduction system  35.07 
 
 
229 aa  117  1.9999999999999998e-25  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_1807  extracellular solute-binding protein  31.19 
 
 
260 aa  115  7.999999999999999e-25  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_0704  putative amino acid-binding protein  32.52 
 
 
257 aa  104  1e-21  Shewanella denitrificans OS217  Bacteria  normal  0.440677  n/a   
 
 
-
 
NC_008740  Maqu_3267  ABC-type amino acid transport/signal transduction system  31.78 
 
 
260 aa  103  3e-21  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_1048  ABC-type amino acid transport/signal transduction systems  28.81 
 
 
260 aa  98.6  7e-20  Ruegeria sp. TM1040  Bacteria  normal  normal  0.163462 
 
 
-
 
NC_011769  DvMF_3196  hypothetical protein  31.48 
 
 
322 aa  94.4  1e-18  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.144092 
 
 
-
 
NC_009831  Ssed_2865  Signal transduction histidine kinase-like protein  26.47 
 
 
2213 aa  94  2e-18  Shewanella sediminis HAW-EB3  Bacteria  normal  hitchhiker  0.000000726448 
 
 
-
 
NC_009831  Ssed_3920  putative amino acid-binding protein  29.27 
 
 
246 aa  92  7e-18  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009831  Ssed_1591  amino acid ABC transporter periplasmic protein  27.88 
 
 
230 aa  91.3  1e-17  Shewanella sediminis HAW-EB3  Bacteria  normal  0.115336  normal 
 
 
-
 
NC_008700  Sama_0551  hypothetical protein  26.36 
 
 
257 aa  83.6  0.000000000000003  Shewanella amazonensis SB2B  Bacteria  normal  0.831394  decreased coverage  0.00317207 
 
 
-
 
NC_009092  Shew_0850  hypothetical protein  27.64 
 
 
275 aa  80.9  0.00000000000002  Shewanella loihica PV-4  Bacteria  hitchhiker  0.000173614  normal 
 
 
-
 
NC_003910  CPS_3588  hypothetical protein  25.89 
 
 
247 aa  78.6  0.00000000000008  Colwellia psychrerythraea 34H  Bacteria  normal  0.623219  n/a   
 
 
-
 
NC_008345  Sfri_0627  ABC-type amino acid transport/signal transduction systems  24.66 
 
 
280 aa  77.4  0.0000000000002  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.225445  n/a   
 
 
-
 
NC_008740  Maqu_2369  ABC-type amino acid transport/signal transduction system  24.88 
 
 
233 aa  68.2  0.0000000001  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_008345  Sfri_3673  putative cation efflux protein  28.63 
 
 
263 aa  62.4  0.000000007  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_0410  putative cation efflux protein  26.32 
 
 
251 aa  58.9  0.00000008  Shewanella denitrificans OS217  Bacteria  normal  0.0293861  n/a   
 
 
-
 
NC_009456  VC0395_0260  putative amino acid ABC transporter, periplasmic amino acid-binding protein  24.9 
 
 
243 aa  57.8  0.0000001  Vibrio cholerae O395  Bacteria  normal  0.906193  n/a   
 
 
-
 
NC_009901  Spea_0574  putative cation efflux protein  26.34 
 
 
243 aa  55.1  0.0000009  Shewanella pealeana ATCC 700345  Bacteria  normal  0.0793473  n/a   
 
 
-
 
NC_009253  Dred_0771  extracellular solute-binding protein  25.12 
 
 
264 aa  47.4  0.0002  Desulfotomaculum reducens MI-1  Bacteria  hitchhiker  0.0000484393  n/a   
 
 
-
 
NC_010501  PputW619_0486  extracellular solute-binding protein  20.91 
 
 
262 aa  45.4  0.0009  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_011366  Rleg2_5951  extracellular solute-binding protein family 3  23.45 
 
 
276 aa  45.1  0.001  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.0245803  normal  0.0107841 
 
 
-
 
NC_012858  Rleg_7091  extracellular solute-binding protein family 3  23.45 
 
 
276 aa  43.5  0.003  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.51636  normal 
 
 
-
 
NC_011146  Gbem_2669  PAS/PAC sensor hybrid histidine kinase  23.2 
 
 
1047 aa  42.7  0.005  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008043  TM1040_3038  extracellular solute-binding protein  21.96 
 
 
250 aa  42.7  0.006  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_1213  extracellular solute-binding protein  27.27 
 
 
292 aa  41.6  0.01  Shewanella sp. MR-7  Bacteria  normal  0.354605  normal 
 
 
-
 
NC_008321  Shewmr4_1142  extracellular solute-binding protein  27.27 
 
 
292 aa  42  0.01  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
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