| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1142 |
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| Symbol | |
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| ID | 4251810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1343063 |
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| End bp | 1343941 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638117723 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_733279 |
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| Protein GI | 113969486 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGCCTA GGTTCGTTTT TCAGTTTAGC CATATCTTGC TGTTATGTAT TTTTATTTTC
CCCACTTTTG GTGCTCCTTC TGAGGCAGTA GTATCTGTCT GTTTAAATCC CCTGAGAGTC
GGTTATAACG ATTGGCCGCC CTATGCCTGG CGAGATCAGC AGGGTGAAGC GCAGGGGCTT
GATGTGGAGC TGCTTCGCGC CTTTGCCGAA CACTTAGGTT GTGAGGTGAT TTTTATCAAT
GTGCCCGCTA AGCGCTCACA CCAAATGCTG AAAAGTGGTT CCTTAGACAT GATGATGGGC
GCTACCAAAA CGGCCAAACG TGAGGAGTAT GCCTTATTTT CAGCCGCCTA CCGTGATGAA
GAAGTGCGTC TATTTGTGTT GGACGAGAAA AAAGACAAGA TCCAGTTGAC CCAATGGCAG
GATATTTTCA GCCAAAAACT ACGTTTATTA GTGCCCATCA GTGGATGGTA TGGCGTGGAT
TATGAGCAGA CGCGGCAGCG CTTAGAACAA GAGCACCTGT TGATACTCAG TCCCGATGCC
GACAAATCGG TGCAAATGCT TACTTATGGC CGAGCGGATC TGATTATCGG TGATTCCATG
GCTATGCCTT ATATAGCCAG TCAGCATCAA GGGGTGAGGT TATCGTCACT GAAACCTGTT
TTGGATCGTA ATCAAATCCA CTTAATGTTC AGCAAGCAAA CATCCTCGTC ATCGCGAGTG
AAGCAATTTA ATGTCGCCAT CGAGGCGCTA AGCGCCAATG GTGAGATTGC CCGAATTGTT
TACAAGTGGC AGCAATTTTC GCTGGCGCAA CAAACCAAAA TGAGTCATCA GTTTAATTCA
TTCTCTTGGC AATATGCTGA CTTGCTCACC ATCGAATGA
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| Protein sequence | MVPRFVFQFS HILLLCIFIF PTFGAPSEAV VSVCLNPLRV GYNDWPPYAW RDQQGEAQGL
DVELLRAFAE HLGCEVIFIN VPAKRSHQML KSGSLDMMMG ATKTAKREEY ALFSAAYRDE
EVRLFVLDEK KDKIQLTQWQ DIFSQKLRLL VPISGWYGVD YEQTRQRLEQ EHLLILSPDA
DKSVQMLTYG RADLIIGDSM AMPYIASQHQ GVRLSSLKPV LDRNQIHLMF SKQTSSSSRV
KQFNVAIEAL SANGEIARIV YKWQQFSLAQ QTKMSHQFNS FSWQYADLLT IE
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