| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_0850 |
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| Symbol | |
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| ID | 4922596 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 972890 |
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| End bp | 973717 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640162383 |
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| Product | hypothetical protein |
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| Protein accession | YP_001092981 |
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| Protein GI | 127511784 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000173614 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAGAT TGCTGCTGGC ATCTGGTTTT ATGCTAGTTT CTAACCCACT ACTGGCACAA
AATGCTAACA CTGAGATCTC CTTTGCGGTC AGCAACACCA TACCCCCTTA CTTCTTTGCT
AACGGTCAAA GCGGAATTCA ATATGAGCGT CTCGCCTCCG CGCTAGCCAA GCAGTCCCTA
TCGATCGGCC ATATCTATCT GTCCCCCAAT AAGCGAGCCT TTCGTCAGGT CGCCAGTGGC
AATGTCGACT GCCTCATTAA TGCGCCGGAA AACTTGGCGG GTCTCTACTA CACCCGCAGC
CTAATCAGCT ACCAAAACAG CGTGTTTACC CTGGCCAGCA ATAAACTGGC CATCGACTCG
GTTGCCGATC TGGCCGGGAT CTCTGTCATG GGGTTTCAGA ACGCGACCCA ATACTTAGGT
AGAGACTTCT ATCAGATGGC GCTCAGTAAC CCACAATATG GCGAATCCAA TAGTCAGAAG
AGTCAGGTGA TGATGCTGTT TTCCGGGCGG GTCGATGCCA TCATCCTAGA GGGGCGCATC
TTCGACTACT ACCGCGAGCA ACTCAAGTTT AGAGTCGACA CACTGCAGCC AACCTCTCGC
CACTCCCTAT TTGCAGCGGC GCCGCGCAAG ATAGCCTGCC ACAGTCAGTC TATAGCACAA
AAGATAGATC TGGGTATTGC GCAACTGGAT AGAGAAGAAG CCGAGGAGGT GAGGAAAAGC
ATTCCCTCTG CGCCCGCGCC CAAACTCGAA CTAGAGCTAG AGCTAGAGCC AGTGTCTAAG
CCTGAGTCGG AACTTGAACC AGAAAAAATG CCTGAAGCTC TCAAGTAA
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| Protein sequence | MRRLLLASGF MLVSNPLLAQ NANTEISFAV SNTIPPYFFA NGQSGIQYER LASALAKQSL
SIGHIYLSPN KRAFRQVASG NVDCLINAPE NLAGLYYTRS LISYQNSVFT LASNKLAIDS
VADLAGISVM GFQNATQYLG RDFYQMALSN PQYGESNSQK SQVMMLFSGR VDAIILEGRI
FDYYREQLKF RVDTLQPTSR HSLFAAAPRK IACHSQSIAQ KIDLGIAQLD REEAEEVRKS
IPSAPAPKLE LELELEPVSK PESELEPEKM PEALK
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