| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_3307 |
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| Symbol | |
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| ID | 4019855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 3939048 |
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| End bp | 3939908 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637957360 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_564306 |
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| Protein GI | 91794655 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAACG AGAAAAATAA GCGAGTTAAT GTTCAAAGAC AGAAAAGAGC CCAGTTTATT
GGTAAAGGCT TCGGCTATGT TTGGCTAATC TGTCTCACTT GCCTTAGCGG CAACCTGAAC
GCTAAAGACC TTAAAATTGG CGTCAGCTTT TCCATTCCCC CTTATGTCAT TCAAGAAACT
GACACAGGTA TTGAACTTGA ATTGTTGCAG AGCGCCCTTG CTGTCAGAGG CCATAAGGCC
AACATAGAGT ATCAGCCTTT CTCACGCACA TTCCGTGAGC TCAAAGAAGG TAAACTAGAC
GGCATTATTA ACGCCAAAAA AAACATATTA GAGAACGTGT TTTATTCTGA TGTGGTGATA
CATTTTCAAA ATTGTGCCAT CAGCCTTAAA GACAAGAAGC TCGGCATCAA TGTACTCGAA
GATCTAAAAG GGAAAAGCAT AGTTGCCTTT CAGCGCGCCT CAACGCTATT GGGTGACGAC
TTCCACCACA CAGTGAAACA CAATCCTAAT TACAGCGAGA TTTCCAATCA AATAGTGCAA
GTGTATATGT TGATGAAGAA AAGGACTGAT GTGGTGGTGA TGGATAAAAA TATTTTTATC
TACTACTTAA GGCAGTCATA CCTCAATGGC AAACTGAATA AAGATGAAGT ACAACAGGAA
GTGATTTGCC ACAAGGTATT TCCACCGACA CCTTATCGAT TCGCATTCTT ACACGCCAAC
ATCCGCGATG ACTTTAATTT GGGACTCGCG CAAATAAAAC AAGACGGTAC CTTGTCAGCT
ATCCAACGTA AATATCAGCT TTTATTGTCA TTAACCTTAG ATGAAGACGT CACCATACGT
TTGGCCTCTG TGCCCAAATA G
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| Protein sequence | MNNEKNKRVN VQRQKRAQFI GKGFGYVWLI CLTCLSGNLN AKDLKIGVSF SIPPYVIQET
DTGIELELLQ SALAVRGHKA NIEYQPFSRT FRELKEGKLD GIINAKKNIL ENVFYSDVVI
HFQNCAISLK DKKLGINVLE DLKGKSIVAF QRASTLLGDD FHHTVKHNPN YSEISNQIVQ
VYMLMKKRTD VVVMDKNIFI YYLRQSYLNG KLNKDEVQQE VICHKVFPPT PYRFAFLHAN
IRDDFNLGLA QIKQDGTLSA IQRKYQLLLS LTLDEDVTIR LASVPK
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