| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0574 |
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| Symbol | |
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| ID | 5660974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 703914 |
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| End bp | 704645 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641235119 |
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| Product | putative cation efflux protein |
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| Protein accession | YP_001500437 |
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| Protein GI | 157960403 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0793473 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGAAGTCTA GATTACTCAT ACTGTTAACA GTGAGCTTTC CTTCAAGCGC CGAGCAAATC
GTAGTGGCTT CTGACATATG GTGCCCTTAC ATTTGCAGCG ACAATTCTGG TTATGTGGTT
GAACTCACAC AGCAAGCCTT CGCCACCGTG GATGTTGAGG TGAAATTTGA AACCATTCCT
TTTCAAAGGG CATTAAAACT CACAAGCCAG CATAAGATCG ATGCCGTTTT GGCTGTCACT
AGTGAGCACA TGCTCAATTT TGAACTTTAT AATAATCACA TTGTAATTGG TCAATACACC
AATGACTTTT ATACCGCTGT AGACTCAAGT TGGCAGTACT CCGACCTAGC AAGCTTAGAT
GATATGCTGA TCGCCACCAT CCTAGGCTAT GATTACGGCC AATCATTAAA TCAGTATCTA
GAAACACGTC ATCCCCAGAT CCGCACATCG GGAGAGACGC CGCTCAAGAG TAATCTTTAC
CTAACCGCAA AACGTCGCGT AGACCTACTA GTCGGTAATC GATACGTTAT CGATCATACT
GCAAGGCAAT TTGGCTATAG CGATGATATT CGTTATGCAG GCAGTGAAAA TGAGATCACC
CCGCTTTACG TGGGATTTGG TAATAATGAC AAGGGGCGAA GTTACGCCAC TAAGTTTGCT
CAAGGCATTG AAAGCCTCAA ACAAAATGGT GAATACCAGG CTATCCTCGA CAAATACCAA
ATCACGTTTT AA
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| Protein sequence | MKSRLLILLT VSFPSSAEQI VVASDIWCPY ICSDNSGYVV ELTQQAFATV DVEVKFETIP
FQRALKLTSQ HKIDAVLAVT SEHMLNFELY NNHIVIGQYT NDFYTAVDSS WQYSDLASLD
DMLIATILGY DYGQSLNQYL ETRHPQIRTS GETPLKSNLY LTAKRRVDLL VGNRYVIDHT
ARQFGYSDDI RYAGSENEIT PLYVGFGNND KGRSYATKFA QGIESLKQNG EYQAILDKYQ
ITF
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