| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2915 |
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| Symbol | |
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| ID | 4605162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3464523 |
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| End bp | 3465335 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639782326 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_928787 |
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| Protein GI | 119776047 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.418761 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAACA AAAGTAACCT AGTAACCAGC TTGTTCCTGG CAAGCCTGGG AGCAACAACA
CAGGTTTCTG CTGAAACCGT CAATGTGGGC GTGAGCTTTG CGATACCGCC CTACGTGATT
CAGCAGGAAA ACAGCGGTCT GGAGCTGGAT ATACTGCGCC AGGCGCTGGC CCGCCGGGGA
CACTATGCGG TGATCCATTA CATGCCGCTG TCCCGCACCT TCCGCGAGCT CAAGGACGGT
AAGCTCGACG GCATCATCAA CACCAAAGAG AATATGCTTG AGGGCGTGTT CTACAGCGAT
GAAGTCATCC GTTTCCATAA CTGCGTTATC AGCCTTGCCT CCCGCAATCT GGACATCAAC
ACCATTGGCG ATTTGAAGGG CATGAGTGTG GTGGCCTTTC AACAGGCGTC GCGGATTCTG
GGAGAAGAGT TTGGCAGCAC AGTCGCCAAA TCGCCGTCTT ACAGCGAAAT TGCCGCCCAG
CGCCATCAAA TTCATATGCT GTTCAAGGGC CGAACCGACG TGATAGTCAT GGAAAAAAGT
ATCTTTGCCT ACTATCGCAA AAAAGAGCTG GAGGCCGGAT TTACGGAGGC CGGGCTTGAG
GTTCGTGAGG CCTGCATTTT CGAACCCACG GCCTACCGTT TTGCCTTTCG CTCGGCCCGA
ATTCGGGATG ACTTCAATCA GGGCCTGAGT TCAATACGGG AAGACGGCAC CCTTGCCGCC
ATCTTGCAAA AATACAAGGC CATGATGACG GTGGAACCCG AAGAAGAGCC CTCCATAGAC
GAGATGCTGC AAGCCCAGCC GGAGCACCCC TGA
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| Protein sequence | MKNKSNLVTS LFLASLGATT QVSAETVNVG VSFAIPPYVI QQENSGLELD ILRQALARRG
HYAVIHYMPL SRTFRELKDG KLDGIINTKE NMLEGVFYSD EVIRFHNCVI SLASRNLDIN
TIGDLKGMSV VAFQQASRIL GEEFGSTVAK SPSYSEIAAQ RHQIHMLFKG RTDVIVMEKS
IFAYYRKKEL EAGFTEAGLE VREACIFEPT AYRFAFRSAR IRDDFNQGLS SIREDGTLAA
ILQKYKAMMT VEPEEEPSID EMLQAQPEHP
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