More than 300 homologs were found in PanDaTox collection
for query gene RoseRS_3151 on replicon NC_009523
Organism: Roseiflexus sp. RS-1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009523  RoseRS_3151  binding-protein-dependent transport systems inner membrane component  100 
 
 
293 aa  564  1e-160  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_2401  binding-protein-dependent transport systems inner membrane component  45.88 
 
 
289 aa  204  2e-51  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009523  RoseRS_1357  binding-protein-dependent transport systems inner membrane component  39.8 
 
 
316 aa  198  7.999999999999999e-50  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2217  binding-protein-dependent transport systems inner membrane component  37.63 
 
 
305 aa  193  3e-48  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2511  binding-protein-dependent transport systems inner membrane component  42.05 
 
 
317 aa  192  4e-48  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.10809  n/a   
 
 
-
 
NC_011661  Dtur_0382  binding-protein-dependent transport systems inner membrane component  37.74 
 
 
296 aa  191  1e-47  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2316  binding-protein-dependent transport systems inner membrane component  37.59 
 
 
313 aa  190  2.9999999999999997e-47  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_3564  binding-protein-dependent transport systems inner membrane component  39.8 
 
 
316 aa  185  9e-46  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.264329 
 
 
-
 
NC_009523  RoseRS_2819  binding-protein-dependent transport systems inner membrane component  39.77 
 
 
315 aa  184  2.0000000000000003e-45  Roseiflexus sp. RS-1  Bacteria  normal  0.0308401  normal 
 
 
-
 
NC_013526  Tter_2041  binding-protein-dependent transport systems inner membrane component  40.47 
 
 
305 aa  183  4.0000000000000006e-45  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00457854  n/a   
 
 
-
 
NC_012669  Bcav_0311  binding-protein-dependent transport systems inner membrane component  35.48 
 
 
321 aa  181  9.000000000000001e-45  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2523  binding-protein-dependent transport systems inner membrane component  36.71 
 
 
309 aa  181  1e-44  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00000000325465  n/a   
 
 
-
 
NC_012669  Bcav_3898  binding-protein-dependent transport systems inner membrane component  37.97 
 
 
324 aa  181  1e-44  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_010465  YPK_1801  binding-protein-dependent transport systems inner membrane component  36.73 
 
 
296 aa  180  2e-44  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.780468  n/a   
 
 
-
 
NC_009708  YpsIP31758_1691  oligogalacturonide ABC tansporter, permease protein  36.73 
 
 
296 aa  180  2e-44  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.041328  n/a   
 
 
-
 
NC_009767  Rcas_2545  binding-protein-dependent transport systems inner membrane component  39.39 
 
 
316 aa  181  2e-44  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.637107  normal  0.115222 
 
 
-
 
NC_009436  Ent638_3289  binding-protein-dependent transport systems inner membrane component  36.73 
 
 
296 aa  180  2.9999999999999997e-44  Enterobacter sp. 638  Bacteria  normal  normal  0.243021 
 
 
-
 
NC_013526  Tter_2453  binding-protein-dependent transport systems inner membrane component  36.95 
 
 
314 aa  179  4.999999999999999e-44  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.000000200699  n/a   
 
 
-
 
NC_009953  Sare_2550  binding-protein-dependent transport systems inner membrane component  44.8 
 
 
289 aa  178  1e-43  Salinispora arenicola CNS-205  Bacteria  normal  0.538878  decreased coverage  0.00000300241 
 
 
-
 
NC_010159  YpAngola_A2645  oligogalacturonide ABC tansporter, permease  36.36 
 
 
296 aa  178  1e-43  Yersinia pestis Angola  Bacteria  normal  0.952468  normal  0.0439933 
 
 
-
 
NC_014210  Ndas_0559  binding-protein-dependent transport systems inner membrane component  37.89 
 
 
305 aa  177  2e-43  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2208  binding-protein-dependent transport systems inner membrane component  38.24 
 
 
306 aa  176  3e-43  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.739705  n/a   
 
 
-
 
NC_010571  Oter_1749  binding-protein-dependent transport systems inner membrane component  39.36 
 
 
307 aa  176  4e-43  Opitutus terrae PB90-1  Bacteria  normal  0.45981  normal 
 
 
-
 
NC_013526  Tter_2506  binding-protein-dependent transport systems inner membrane component  40.16 
 
 
306 aa  175  9.999999999999999e-43  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.000185658  n/a   
 
 
-
 
NC_013517  Sterm_4049  binding-protein-dependent transport systems inner membrane component  33.45 
 
 
292 aa  174  1.9999999999999998e-42  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0774  binding-protein-dependent transport systems inner membrane component  33.68 
 
 
293 aa  171  9e-42  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_2034  binding-protein-dependent transport systems inner membrane component  36.36 
 
 
296 aa  171  9e-42  Dickeya dadantii Ech703  Bacteria  normal  0.963086  n/a   
 
 
-
 
NC_012912  Dd1591_1969  binding-protein-dependent transport systems inner membrane component  36 
 
 
296 aa  170  2e-41  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_3328  binding-protein-dependent transport systems inner membrane component  34.35 
 
 
314 aa  171  2e-41  Arthrobacter sp. FB24  Bacteria  normal  0.0166533  n/a   
 
 
-
 
NC_012917  PC1_1907  binding-protein-dependent transport systems inner membrane component  36 
 
 
296 aa  169  6e-41  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0961638  n/a   
 
 
-
 
NC_009616  Tmel_1015  binding-protein-dependent transport systems inner membrane component  31.83 
 
 
292 aa  169  6e-41  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2615  binding-protein-dependent transport systems inner membrane component  40.98 
 
 
307 aa  168  8e-41  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.0000296099  n/a   
 
 
-
 
NC_012034  Athe_2375  binding-protein-dependent transport systems inner membrane component  32.98 
 
 
298 aa  168  1e-40  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_2459  binding-protein-dependent transport systems inner membrane component  36.14 
 
 
331 aa  167  2e-40  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.216304  n/a   
 
 
-
 
NC_012669  Bcav_1533  binding-protein-dependent transport systems inner membrane component  39.02 
 
 
318 aa  167  2e-40  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.384041  normal  0.0165665 
 
 
-
 
NC_013421  Pecwa_2200  binding-protein-dependent transport systems inner membrane component  35.64 
 
 
296 aa  167  2.9999999999999998e-40  Pectobacterium wasabiae WPP163  Bacteria  normal  0.467118  n/a   
 
 
-
 
NC_013530  Xcel_2535  binding-protein-dependent transport systems inner membrane component  36.4 
 
 
314 aa  165  6.9999999999999995e-40  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_2544  binding-protein-dependent transport systems inner membrane component  38.71 
 
 
313 aa  165  1.0000000000000001e-39  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_3130  binding-protein-dependent transport systems inner membrane component  34.01 
 
 
314 aa  165  1.0000000000000001e-39  Arthrobacter chlorophenolicus A6  Bacteria  n/a    decreased coverage  0.00699527 
 
 
-
 
NC_013525  Tter_0507  binding-protein-dependent transport systems inner membrane component  36.21 
 
 
309 aa  164  2.0000000000000002e-39  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009664  Krad_0590  binding-protein-dependent transport systems inner membrane component  37.76 
 
 
322 aa  164  2.0000000000000002e-39  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0414899  normal  0.0385996 
 
 
-
 
NC_008262  CPR_0477  ABC tranporter, permease protein  33.33 
 
 
315 aa  163  3e-39  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_0698  binding-protein-dependent transport systems inner membrane component  33.57 
 
 
293 aa  162  5.0000000000000005e-39  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2136  binding-protein-dependent transport systems inner membrane component  36.52 
 
 
307 aa  162  6e-39  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_2080  binding-protein-dependent transport systems inner membrane component  35.56 
 
 
308 aa  161  1e-38  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.136718  n/a   
 
 
-
 
NC_011369  Rleg2_4016  binding-protein-dependent transport systems inner membrane component  36.49 
 
 
319 aa  159  5e-38  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_0830  binding-protein-dependent transport systems inner membrane component  37.54 
 
 
309 aa  159  7e-38  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011661  Dtur_0438  binding-protein-dependent transport systems inner membrane component  33.8 
 
 
302 aa  156  5.0000000000000005e-37  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.00000597022  n/a   
 
 
-
 
NC_013521  Sked_27700  permease component of ABC-type sugar transporter  32.88 
 
 
321 aa  156  5.0000000000000005e-37  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.479477 
 
 
-
 
NC_013521  Sked_05250  carbohydrate ABC transporter membrane protein  38.16 
 
 
309 aa  155  7e-37  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013501  Rmar_0359  binding-protein-dependent transport systems inner membrane component  37.22 
 
 
300 aa  154  1e-36  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1469  binding-protein-dependent transport systems inner membrane component  34.67 
 
 
283 aa  154  1e-36  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011886  Achl_0498  binding-protein-dependent transport systems inner membrane component  35.58 
 
 
317 aa  155  1e-36  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000449996 
 
 
-
 
NC_012850  Rleg_4345  binding-protein-dependent transport systems inner membrane component  36.14 
 
 
319 aa  154  1e-36  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  hitchhiker  0.0000915897 
 
 
-
 
NC_010003  Pmob_0955  binding-protein-dependent transport systems inner membrane component  35.37 
 
 
291 aa  154  1e-36  Petrotoga mobilis SJ95  Bacteria  normal  0.0196347  n/a   
 
 
-
 
NC_013172  Bfae_29330  permease component of ABC-type sugar transporter  35.71 
 
 
321 aa  154  2e-36  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0263  binding-protein-dependent transport systems inner membrane component  34.53 
 
 
317 aa  154  2e-36  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_010001  Cphy_3401  binding-protein-dependent transport systems inner membrane component  29.93 
 
 
305 aa  154  2e-36  Clostridium phytofermentans ISDg  Bacteria  normal  0.028536  n/a   
 
 
-
 
NC_013530  Xcel_0898  binding-protein-dependent transport systems inner membrane component  34.64 
 
 
319 aa  154  2e-36  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.14469  n/a   
 
 
-
 
NC_012669  Bcav_3792  binding-protein-dependent transport systems inner membrane component  32.85 
 
 
285 aa  153  2.9999999999999998e-36  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.168129  normal 
 
 
-
 
NC_011661  Dtur_0377  binding-protein-dependent transport systems inner membrane component  32.36 
 
 
294 aa  153  4e-36  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_014213  Mesil_3393  binding-protein-dependent transport systems inner membrane component  35.63 
 
 
291 aa  152  5e-36  Meiothermus silvanus DSM 9946  Bacteria  normal  0.199241  normal  0.935882 
 
 
-
 
NC_011899  Hore_20620  binding-protein-dependent transport systems inner membrane component  33.94 
 
 
299 aa  152  7e-36  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_4634  binding-protein-dependent transport systems inner membrane component  38.22 
 
 
292 aa  152  8.999999999999999e-36  Nocardioides sp. JS614  Bacteria  normal  0.219562  n/a   
 
 
-
 
NC_013172  Bfae_01240  permease component of ABC-type sugar transporter  37.21 
 
 
334 aa  151  1e-35  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0593  binding-protein-dependent transport systems inner membrane component  31.48 
 
 
308 aa  151  1e-35  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.000379306  n/a   
 
 
-
 
NC_013093  Amir_0971  binding-protein-dependent transport systems inner membrane component  36.79 
 
 
318 aa  151  1e-35  Actinosynnema mirum DSM 43827  Bacteria  normal  0.402329  n/a   
 
 
-
 
NC_013530  Xcel_2648  binding-protein-dependent transport systems inner membrane component  36.77 
 
 
315 aa  151  2e-35  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.604604  n/a   
 
 
-
 
NC_012669  Bcav_0792  binding-protein-dependent transport systems inner membrane component  38.11 
 
 
320 aa  150  2e-35  Beutenbergia cavernae DSM 12333  Bacteria  normal  hitchhiker  0.00615148 
 
 
-
 
NC_009636  Smed_3328  binding-protein-dependent transport systems inner membrane component  36.14 
 
 
318 aa  150  2e-35  Sinorhizobium medicae WSM419  Bacteria  normal  0.670475  normal  0.953703 
 
 
-
 
NC_011988  Avi_5581  ABC transporter membrane spanning protein (galacturonic acid)  36.43 
 
 
314 aa  149  6e-35  Agrobacterium vitis S4  Bacteria  normal  0.512211  n/a   
 
 
-
 
NC_013093  Amir_2919  binding-protein-dependent transport systems inner membrane component  37.3 
 
 
310 aa  149  7e-35  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_05430  carbohydrate ABC transporter membrane protein  33.45 
 
 
321 aa  149  7e-35  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0550121  normal 
 
 
-
 
NC_008541  Arth_3323  binding-protein-dependent transport systems inner membrane component  34.17 
 
 
317 aa  149  7e-35  Arthrobacter sp. FB24  Bacteria  normal  0.0473972  n/a   
 
 
-
 
NC_009664  Krad_2230  binding-protein-dependent transport systems inner membrane component  37.45 
 
 
316 aa  149  8e-35  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013721  HMPREF0424_1290  ABC transporter, permease protein  33.7 
 
 
311 aa  148  8e-35  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_012669  Bcav_3990  binding-protein-dependent transport systems inner membrane component  35.36 
 
 
317 aa  148  1.0000000000000001e-34  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2266  binding-protein-dependent transport systems inner membrane component  34.34 
 
 
296 aa  148  1.0000000000000001e-34  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.0000392628 
 
 
-
 
NC_012669  Bcav_3002  binding-protein-dependent transport systems inner membrane component  35.42 
 
 
320 aa  148  1.0000000000000001e-34  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013517  Sterm_0718  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
319 aa  146  4.0000000000000006e-34  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.491906  n/a   
 
 
-
 
NC_011886  Achl_3123  binding-protein-dependent transport systems inner membrane component  34.05 
 
 
317 aa  146  4.0000000000000006e-34  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.205507 
 
 
-
 
NC_007333  Tfu_1704  putative transport system permease ABC transporter protein  35.09 
 
 
324 aa  145  6e-34  Thermobifida fusca YX  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0691  binding-protein-dependent transport systems inner membrane component  33.21 
 
 
295 aa  145  6e-34  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_29720  carbohydrate ABC transporter membrane protein  34.39 
 
 
312 aa  145  6e-34  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_002977  MCA1942  sugar ABC transporter, permease protein  36.69 
 
 
287 aa  145  7.0000000000000006e-34  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_003909  BCE_1900  sugar ABC transporter, permease protein, putative  32.93 
 
 
314 aa  145  7.0000000000000006e-34  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK1635  sugar ABC transporter, permease  32.93 
 
 
314 aa  145  7.0000000000000006e-34  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0321  binding-protein-dependent transport systems inner membrane component  34.69 
 
 
316 aa  145  7.0000000000000006e-34  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0801  binding-protein-dependent transport systems inner membrane component  35.96 
 
 
319 aa  145  8.000000000000001e-34  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.836257  decreased coverage  0.00115511 
 
 
-
 
NC_010320  Teth514_1100  binding-protein-dependent transport systems inner membrane component  32.87 
 
 
300 aa  145  8.000000000000001e-34  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0125  binding-protein-dependent transport systems inner membrane component  34.89 
 
 
302 aa  145  9e-34  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013526  Tter_2000  binding-protein-dependent transport systems inner membrane component  38.99 
 
 
319 aa  144  1e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_008254  Meso_3558  binding-protein-dependent transport systems inner membrane component  36.4 
 
 
295 aa  144  1e-33  Chelativorans sp. BNC1  Bacteria  normal  0.727517  n/a   
 
 
-
 
NC_009664  Krad_2143  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
318 aa  144  1e-33  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2527  binding-protein-dependent transport systems inner membrane component  35.42 
 
 
309 aa  144  2e-33  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.849073  n/a   
 
 
-
 
NC_011884  Cyan7425_3980  binding-protein-dependent transport systems inner membrane component  36.96 
 
 
299 aa  143  4e-33  Cyanothece sp. PCC 7425  Bacteria  normal  hitchhiker  0.00655631 
 
 
-
 
NC_012669  Bcav_0146  binding-protein-dependent transport systems inner membrane component  38.11 
 
 
292 aa  143  4e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0896196  normal 
 
 
-
 
NC_012669  Bcav_0920  binding-protein-dependent transport systems inner membrane component  35.93 
 
 
319 aa  143  4e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1297  binding-protein-dependent transport systems inner membrane component  36.33 
 
 
279 aa  143  4e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.983189  normal 
 
 
-
 
NC_009565  TBFG_12077  sugar ABC transporter membrane protein  32.39 
 
 
300 aa  142  5e-33  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
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