More than 300 homologs were found in PanDaTox collection
for query gene Glov_3685 on replicon NC_010815
Organism: Geobacter lovleyi SZ



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_010815  Glov_3685  histone family protein DNA-binding protein  100 
 
 		 93 aa  184  5e-46  Geobacter lovleyi SZ  Bacteria  normal  0.166156  normal  1 
 
 
-
 
NC_010814  Glov_1918  histone family protein DNA-binding protein  58.24 
 
 		 92 aa  109  1.0000000000000001e-23  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.0000225021  n/a   
 
 
-
 
NC_010814  Glov_0238  histone family protein DNA-binding protein  51.65 
 
 		 91 aa  105  3e-22  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_008609  Ppro_0180  histone family protein DNA-binding protein  51.65 
 
 		 91 aa  103  6e-22  Pelobacter propionicus DSM 2379  Bacteria  normal  0.75268  n/a   
 
 
-
 
NC_002939  GSU2120  integration host factor, alpha subunit  49.45 
 
 		 91 aa  102  1e-21  Geobacter sulfurreducens PCA  Bacteria  normal  1  n/a   
 
 
-
 
NC_010814  Glov_2356  histone family protein DNA-binding protein  52.22 
 
 		 94 aa  103  1e-21  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_008609  Ppro_1872  histone family protein DNA-binding protein  55.56 
 
 		 94 aa  102  2e-21  Pelobacter propionicus DSM 2379  Bacteria  decreased coverage  0.0000425439  n/a   
 
 
-
 
NC_009483  Gura_2622  histone family protein DNA-binding protein  52.75 
 
 		 92 aa  97.4  6e-20  Geobacter uraniireducens Rf4  Bacteria  normal  0.349381  n/a   
 
 
-
 
NC_008607  Ppro_3754  histone family protein DNA-binding protein  49.45 
 
 		 101 aa  96.3  1e-19  Pelobacter propionicus DSM 2379  Bacteria  normal  0.159868  n/a   
 
 
-
 
NC_011146  Gbem_1996  histone family protein DNA-binding protein  53.33 
 
 		 92 aa  96.3  1e-19  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_012918  GM21_2224  histone family protein DNA-binding protein  53.33 
 
 		 92 aa  96.3  1e-19  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000923552 
 
 
-
 
NC_008609  Ppro_2302  histone family protein DNA-binding protein  48.89 
 
 		 97 aa  95.1  3e-19  Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
-
 
NC_007517  Gmet_1417  histone-like DNA-binding protein  50 
 
 		 91 aa  93.2  1e-18  Geobacter metallireducens GS-15  Bacteria  decreased coverage  0.00000053245  normal  0.466182 
 
 
-
 
NC_010814  Glov_1888  histone family protein DNA-binding protein  47.25 
 
 		 93 aa  92.4  2e-18  Geobacter lovleyi SZ  Bacteria  hitchhiker  0.00000630839  n/a   
 
 
-
 
NC_002939  GSU1521  integration host factor, alpha subunit  50 
 
 		 91 aa  91.7  3e-18  Geobacter sulfurreducens PCA  Bacteria  normal  0.43426  n/a   
 
 
-
 
NC_009943  Dole_1031  histone family protein DNA-binding protein  48.91 
 
 		 94 aa  89.4  2e-17  Desulfococcus oleovorans Hxd3  Bacteria  normal  1  n/a   
 
 
-
 
NC_008554  Sfum_0002  histone family protein DNA-binding protein  46.74 
 
 		 95 aa  88.2  3e-17  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  1  normal  0.634668 
 
 
-
 
NC_013440  Hoch_3742  integration host factor, alpha subunit  51.65 
 
 		 100 aa  88.2  4e-17  Haliangium ochraceum DSM 14365  Bacteria  normal  0.266099  normal  0.554438 
 
 
-
 
NC_010338  Caul_3032  integration host factor subunit alpha  43.96 
 
 		 100 aa  87.4  6e-17  Caulobacter sp. K31  Bacteria  normal  0.814183  normal  0.51505 
 
 
-
 
NC_007498  Pcar_1424  integration host factor, alpha subunit  47.25 
 
 		 93 aa  87.4  7e-17  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.000000184784  n/a   
 
 
-
 
NC_009675  Anae109_1886  integration host factor, alpha subunit  48.89 
 
 		 99 aa  87  8e-17  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  1  normal  0.067674 
 
 
-
 
NC_011891  A2cp1_1994  integration host factor subunit alpha  47.78 
 
 		 113 aa  86.7  1e-16  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.110028  n/a   
 
 
-
 
NC_007760  Adeh_1969  integration host factor subunit alpha  47.78 
 
 		 113 aa  86.3  1e-16  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  decreased coverage  0.0019696  n/a   
 
 
-
 
NC_011145  AnaeK_1909  integration host factor subunit alpha  47.78 
 
 		 113 aa  86.7  1e-16  Anaeromyxobacter sp. K  Bacteria  normal  1  n/a   
 
 
-
 
NC_008576  Mmc1_1308  integration host factor, alpha subunit  40.86 
 
 		 96 aa  83.2  0.000000000000001  Magnetococcus sp. MC-1  Bacteria  normal  0.110729  normal  0.113899 
 
 
-
 
NC_008576  Mmc1_2837  integration host factor, alpha subunit  40.86 
 
 		 96 aa  83.2  0.000000000000001  Magnetococcus sp. MC-1  Bacteria  normal  1  normal  0.560391 
 
 
-
 
NC_007517  Gmet_3056  histone-like DNA-binding protein  58.21 
 
 		 70 aa  81.6  0.000000000000003  Geobacter metallireducens GS-15  Bacteria  hitchhiker  0.00216712  normal  0.450176 
 
 
-
 
NC_008576  Mmc1_0092  integration host factor, alpha subunit  39.78 
 
 		 96 aa  81.3  0.000000000000004  Magnetococcus sp. MC-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013206  Aaci_3021  histone family protein DNA-binding protein  41.57 
 
 		 91 aa  80.5  0.000000000000007  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_009720  Xaut_4386  integration host factor subunit alpha  43.33 
 
 		 105 aa  79.7  0.00000000000001  Xanthobacter autotrophicus Py2  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011138  MADE_02444  integration host factor subunit alpha  42.86 
 
 		 99 aa  79.7  0.00000000000001  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  0.0239469  n/a   
 
 
-
 
NC_009952  Dshi_1721  integration host factor subunit alpha  41.57 
 
 		 101 aa  79.3  0.00000000000001  Dinoroseobacter shibae DFL 12  Bacteria  normal  1  normal  0.20238 
 
 
-
 
NC_002977  MCA0699  integration host factor, alpha subunit  40.66 
 
 		 110 aa  78.6  0.00000000000003  Methylococcus capsulatus str. Bath  Bacteria  normal  0.101642  n/a   
 
 
-
 
NC_008576  Mmc1_2066  histone family protein DNA-binding protein  39.78 
 
 		 96 aa  78.6  0.00000000000003  Magnetococcus sp. MC-1  Bacteria  normal  0.0151573  normal  0.0307136 
 
 
-
 
NC_011059  Paes_0293  histone family protein DNA-binding protein  37.36 
 
 		 94 aa  78.6  0.00000000000003  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.416752  normal  0.0238993 
 
 
-
 
NC_007493  RSP_2611  integration host factor subunit alpha  39.33 
 
 		 100 aa  78.2  0.00000000000004  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009428  Rsph17025_1913  integration host factor subunit alpha  39.33 
 
 		 100 aa  78.2  0.00000000000004  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.749601  normal  1 
 
 
-
 
NC_009049  Rsph17029_1269  integration host factor subunit alpha  39.33 
 
 		 100 aa  78.2  0.00000000000004  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  0.272817 
 
 
-
 
NC_011312  VSAL_I1731  integration host factor subunit alpha  43.96 
 
 		 98 aa  77.8  0.00000000000005  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.074622  n/a   
 
 
-
 
NC_010511  M446_6231  integration host factor, alpha subunit  41.11 
 
 		 104 aa  77.4  0.00000000000006  Methylobacterium sp. 4-46  Bacteria  normal  0.75949  normal  1 
 
 
-
 
NC_011894  Mnod_7074  integration host factor, alpha subunit  41.11 
 
 		 105 aa  77.4  0.00000000000006  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.15437  n/a   
 
 
-
 
NC_009457  VC0395_A0846  integration host factor subunit alpha  41.76 
 
 		 98 aa  77  0.00000000000007  Vibrio cholerae O395  Bacteria  hitchhiker  0.0000000000670658  n/a   
 
 
-
 
NC_009513  Lreu_0765  nucleoid protein Hbs  43.18 
 
 		 91 aa  77.4  0.00000000000007  Lactobacillus reuteri DSM 20016  Bacteria  hitchhiker  0.00000296782  n/a   
 
 
-
 
NC_010505  Mrad2831_3967  histone family protein DNA-binding protein  42.22 
 
 		 106 aa  77  0.00000000000008  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.225814  normal  0.0228483 
 
 
-
 
NC_011658  BCAH187_A2477  DNA-binding protein HU  42.7 
 
 		 90 aa  77  0.00000000000009  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_003909  BCE_2407  DNA-binding protein HU  42.7 
 
 		 90 aa  77  0.00000000000009  Bacillus cereus ATCC 10987  Bacteria  normal  0.020348  n/a   
 
 
-
 
NC_011773  BCAH820_2395  DNA-binding protein HU  42.7 
 
 		 90 aa  77  0.00000000000009  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_005945  BAS2213  DNA-binding protein HU  42.7 
 
 		 90 aa  77  0.00000000000009  Bacillus anthracis str. Sterne  Bacteria  normal  0.519209  n/a   
 
 
-
 
NC_005957  BT9727_2152  DNA-binding protein HU  42.7 
 
 		 90 aa  77  0.00000000000009  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.0274093  n/a   
 
 
-
 
NC_006274  BCZK2136  DNA-binding protein HU  42.7 
 
 		 90 aa  77  0.00000000000009  Bacillus cereus E33L  Bacteria  normal  1  n/a   
 
 
-
 
NC_007530  GBAA_2377  DNA-binding protein HU  42.7 
 
 		 90 aa  77  0.00000000000009  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_002977  MCA0532  DNA-binding protein HU-beta  38.89 
 
 		 90 aa  76.3  0.0000000000001  Methylococcus capsulatus str. Bath  Bacteria  decreased coverage  0.00043104  n/a   
 
 
-
 
NC_011761  AFE_1070  DNA-binding protein, HU family  41.57 
 
 		 91 aa  76.3  0.0000000000001  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  0.0248006  n/a   
 
 
-
 
NC_011725  BCB4264_A2342  DNA-binding protein HU  42.7 
 
 		 90 aa  76.6  0.0000000000001  Bacillus cereus B4264  Bacteria  normal  0.868034  n/a   
 
 
-
 
NC_010184  BcerKBAB4_2184  histone family protein DNA-binding protein  41.57 
 
 		 90 aa  76.3  0.0000000000001  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.170143  n/a   
 
 
-
 
NC_011772  BCG9842_B2983  DNA-binding protein HU  42.7 
 
 		 90 aa  76.6  0.0000000000001  Bacillus cereus G9842  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008228  Patl_2493  integration host factor subunit alpha  39.56 
 
 		 98 aa  76.3  0.0000000000001  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.044668  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1434  histone family protein DNA-binding protein  42.7 
 
 		 90 aa  75.9  0.0000000000002  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.087278  n/a   
 
 
-
 
NC_003909  BCE_1637  DNA-binding protein HU  42.7 
 
 		 90 aa  75.9  0.0000000000002  Bacillus cereus ATCC 10987  Bacteria  decreased coverage  0.00420342  n/a   
 
 
-
 
NC_011725  BCB4264_A1566  DNA-binding protein HU  42.7 
 
 		 90 aa  75.9  0.0000000000002  Bacillus cereus B4264  Bacteria  normal  0.236067  n/a   
 
 
-
 
NC_005945  BAS1420  DNA-binding protein HU  42.7 
 
 		 90 aa  75.9  0.0000000000002  Bacillus anthracis str. Sterne  Bacteria  normal  0.190218  n/a   
 
 
-
 
NC_005957  BT9727_1392  DNA-binding protein HU  42.7 
 
 		 90 aa  75.9  0.0000000000002  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.011833  n/a   
 
 
-
 
NC_006274  BCZK1392  DNA-binding protein HU  42.7 
 
 		 90 aa  75.9  0.0000000000002  Bacillus cereus E33L  Bacteria  decreased coverage  0.00000512711  n/a   
 
 
-
 
NC_009674  Bcer98_1233  histone family protein DNA-binding protein  42.7 
 
 		 90 aa  75.9  0.0000000000002  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.0133564  n/a   
 
 
-
 
NC_011773  BCAH820_1604  DNA-binding protein HU  42.7 
 
 		 90 aa  75.9  0.0000000000002  Bacillus cereus AH820  Bacteria  n/a    hitchhiker  0.000159132 
 
 
-
 
NC_007530  GBAA_1531  DNA-binding protein HU  42.7 
 
 		 90 aa  75.9  0.0000000000002  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  0.259543  n/a   
 
 
-
 
NC_011757  Mchl_2330  histone family protein DNA-binding protein  42.22 
 
 		 108 aa  75.5  0.0000000000002  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  0.45414 
 
 
-
 
NC_011658  BCAH187_A1673  DNA-binding protein HU  42.7 
 
 		 90 aa  75.9  0.0000000000002  Bacillus cereus AH187  Bacteria  hitchhiker  0.0000325838  n/a   
 
 
-
 
NC_009674  Bcer98_1763  histone family protein DNA-binding protein  41.57 
 
 		 90 aa  75.5  0.0000000000002  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  0.203917  n/a   
 
 
-
 
NC_013421  Pecwa_2186  integration host factor subunit alpha  38.46 
 
 		 98 aa  75.5  0.0000000000002  Pectobacterium wasabiae WPP163  Bacteria  normal  0.874244  n/a   
 
 
-
 
NC_011772  BCG9842_B3779  DNA-binding protein HU  42.7 
 
 		 90 aa  75.9  0.0000000000002  Bacillus cereus G9842  Bacteria  decreased coverage  0.000354145  normal  0.961445 
 
 
-
 
NC_008531  LEUM_1290  nucleoid protein Hbs  42.05 
 
 		 91 aa  75.5  0.0000000000002  Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293  Bacteria  hitchhiker  0.00000854913  n/a   
 
 
-
 
NC_008532  STER_1175  histone-like DNA-binding protein  44.32 
 
 		 91 aa  75.5  0.0000000000002  Streptococcus thermophilus LMD-9  Bacteria  hitchhiker  0.000000211181  n/a   
 
 
-
 
NC_010172  Mext_2055  histone family protein DNA-binding protein  42.22 
 
 		 108 aa  75.5  0.0000000000002  Methylobacterium extorquens PA1  Bacteria  normal  1  normal  0.283238 
 
 
-
 
CP001509  ECD_01681  integration host factor subunit alpha  38.46 
 
 		 99 aa  75.1  0.0000000000003  Escherichia coli BL21(DE3)  Bacteria  decreased coverage  0.00950044  n/a   
 
 
-
 
CP001637  EcDH1_1930  integration host factor, alpha subunit  38.46 
 
 		 99 aa  75.1  0.0000000000003  Escherichia coli DH1  Bacteria  hitchhiker  0.000106762  n/a   
 
 
-
 
NC_009801  EcE24377A_1931  integration host factor subunit alpha  38.46 
 
 		 99 aa  75.1  0.0000000000003  Escherichia coli E24377A  Bacteria  hitchhiker  0.000683366  n/a   
 
 
-
 
NC_002976  SERP1041  DNA-binding protein HU  42.7 
 
 		 90 aa  75.1  0.0000000000003  Staphylococcus epidermidis RP62A  Bacteria  normal  0.436255  n/a   
 
 
-
 
NC_012917  PC1_1894  integration host factor subunit alpha  38.46 
 
 		 98 aa  75.5  0.0000000000003  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.585308  n/a   
 
 
-
 
NC_012892  B21_01670  hypothetical protein  38.46 
 
 		 99 aa  75.1  0.0000000000003  Escherichia coli BL21  Bacteria  decreased coverage  0.00452626  n/a   
 
 
-
 
NC_012912  Dd1591_1957  integration host factor subunit alpha  38.46 
 
 		 99 aa  75.5  0.0000000000003  Dickeya zeae Ech1591  Bacteria  normal  0.126843  n/a   
 
 
-
 
NC_009632  SaurJH1_1560  histone family protein DNA-binding protein  42.7 
 
 		 90 aa  75.1  0.0000000000003  Staphylococcus aureus subsp. aureus JH1  Bacteria  normal  0.768925  n/a   
 
 
-
 
NC_007514  Cag_0362  histone-like DNA-binding protein  36.67 
 
 		 91 aa  75.5  0.0000000000003  Chlorobium chlorochromatii CaD3  Bacteria  normal  1  n/a   
 
 
-
 
NC_012880  Dd703_2047  integration host factor subunit alpha  38.46 
 
 		 99 aa  75.5  0.0000000000003  Dickeya dadantii Ech703  Bacteria  normal  0.0240665  n/a   
 
 
-
 
NC_008686  Pden_1863  integration host factor subunit alpha  40.45 
 
 		 102 aa  75.1  0.0000000000003  Paracoccus denitrificans PD1222  Bacteria  hitchhiker  0.00832208  normal  0.529294 
 
 
-
 
NC_007802  Jann_1783  integration host factor subunit alpha  38.2 
 
 		 100 aa  75.1  0.0000000000003  Jannaschia sp. CCS1  Bacteria  normal  0.783563  normal  0.198181 
 
 
-
 
NC_011353  ECH74115_2430  integration host factor subunit alpha  38.46 
 
 		 99 aa  75.1  0.0000000000003  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  0.446554  normal  1 
 
 
-
 
NC_013411  GYMC61_0465  histone family protein DNA-binding protein  41.57 
 
 		 90 aa  75.1  0.0000000000003  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_009487  SaurJH9_1530  histone family protein DNA-binding protein  42.7 
 
 		 90 aa  75.1  0.0000000000003  Staphylococcus aureus subsp. aureus JH9  Bacteria  normal  0.277737  n/a   
 
 
-
 
NC_010803  Clim_0201  histone family protein DNA-binding protein  36.67 
 
 		 91 aa  75.1  0.0000000000003  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.000000429798  n/a   
 
 
-
 
NC_009674  Bcer98_2403  histone family protein DNA-binding protein  41.57 
 
 		 90 aa  75.1  0.0000000000003  Bacillus cytotoxicus NVH 391-98  Bacteria  unclonable  0.00000000237544  n/a   
 
 
-
 
NC_008044  TM1040_0913  integration host factor subunit alpha  38.2 
 
 		 100 aa  75.5  0.0000000000003  Ruegeria sp. TM1040  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010658  SbBS512_E1954  integration host factor subunit alpha  38.46 
 
 		 99 aa  75.1  0.0000000000003  Shigella boydii CDC 3083-94  Bacteria  normal  0.57207  n/a   
 
 
-
 
NC_010498  EcSMS35_1478  integration host factor subunit alpha  38.46 
 
 		 99 aa  75.1  0.0000000000003  Escherichia coli SMS-3-5  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010468  EcolC_1919  integration host factor subunit alpha  38.46 
 
 		 99 aa  75.1  0.0000000000003  Escherichia coli ATCC 8739  Bacteria  normal  1  normal  0.445655 
 
 
-
 
NC_009436  Ent638_1730  integration host factor subunit alpha  38.46 
 
 		 99 aa  74.7  0.0000000000004  Enterobacter sp. 638  Bacteria  normal  0.976876  normal  0.494462 
 
 
-
 
NC_011094  SeSA_A1434  integration host factor subunit alpha  38.46 
 
 		 99 aa  74.7  0.0000000000004  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  1  normal  0.0289441 
 
 
-
 
NC_007520  Tcr_1661  integration host factor, alpha subunit  38.71 
 
 		 97 aa  74.7  0.0000000000004  Thiomicrospira crunogena XCL-2  Bacteria  normal  1  n/a   
 
 
-
 
NC_012793  GWCH70_2154  histone family protein DNA-binding protein  41.57 
 
 		 90 aa  74.7  0.0000000000004  Geobacillus sp. WCH70  Bacteria  hitchhiker  0.000000552537  n/a   
 
 
-
 
NC_011080  SNSL254_A1450  integration host factor subunit alpha  38.46 
 
 		 99 aa  74.7  0.0000000000004  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  1  normal  1 
 
 
-
 
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