Gene SbBS512_E1954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E1954 
SymbolihfA 
ID6273205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp1786986 
End bp1787285 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content50% 
IMG OID641726008 
Productintegration host factor subunit alpha 
Protein accessionYP_001880502 
Protein GI187732420 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID[TIGR00987] integration host factor, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.57207 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCTTA CAAAAGCTGA AATGTCAGAA TATCTGTTTG ATAAGCTTGG GCTTAGCAAG 
CGGGATGCCA AAGAACTGGT TGAACTGTTT TTCGAAGAGA TCCGTCGCGC TCTGGAAAAC
GGCGAACAGG TGAAACTCTC TGGTTTTGGT AACTTCGATC TGCGTGATAA GAATCAACGC
CCGGGACGTA ACCCGAAAAC GGGCGAGGAT ATTCCCATTA CAGCACGGCG CGTGGTGACC
TTCAGACCCG GGCAGAAGTT AAAAAGCCGG GTCGAAAACG CTTCGCCCAA AGACGAGTAA
 
Protein sequence
MALTKAEMSE YLFDKLGLSK RDAKELVELF FEEIRRALEN GEQVKLSGFG NFDLRDKNQR 
PGRNPKTGED IPITARRVVT FRPGQKLKSR VENASPKDE