Gene Rsph17029_1269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRsph17029_1269 
SymbolihfA 
ID4896254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides ATCC 17029 
KingdomBacteria 
Replicon accessionNC_009049 
Strand
Start bp1314789 
End bp1315091 
Gene Length303 bp 
Protein Length100 aa 
Translation table11 
GC content65% 
IMG OID640111856 
Productintegration host factor subunit alpha 
Protein accessionYP_001043151 
Protein GI126462037 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID[TIGR00987] integration host factor, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.272817 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACA AGACCTTGAC GCGCATGGAT CTGAGCGAAG CGGTGTTTCG CGAGGTGGGC 
CTGTCTCGCA ATGAATCCGC GCAGCTGGTG GAATCCGTGC TTCAGCATGT GTCGGACGCG
CTGGCCTCGG GCGAGACGGT GAAGATATCC TCCTTCGGCA CCTTCACGGT GCGCGACAAG
TCGGCCCGGA TCGGCCGCAA CCCCAAGACG GGCGACGAGG TGCCGATCTC GCCCCGCCGG
GTCCTCACCT TCCGCCCCTC GCATCTGATG AAGGAGCGTG TCGCCGCCGG CGGCAAGAAC
TGA
 
Protein sequence
MSDKTLTRMD LSEAVFREVG LSRNESAQLV ESVLQHVSDA LASGETVKIS SFGTFTVRDK 
SARIGRNPKT GDEVPISPRR VLTFRPSHLM KERVAAGGKN