Gene AFE_1070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_1070 
Symbol 
ID7134749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp966017 
End bp966292 
Gene Length276 bp 
Protein Length91 aa 
Translation table11 
GC content59% 
IMG OID643529467 
ProductDNA-binding protein, HU family 
Protein accessionYP_002425542 
Protein GI218667321 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID[TIGR00987] integration host factor, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0248006 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCATCA CAAAACTGGA TTTGACCCGC CACCTATCGG ATACCATGGG TCTGACCGCC 
AAAGAATGCG CCGCGCTGGT CAATGCCATG TTCGACACCA TCCGCGCCAC ATTGGCCTCT
GGTGAGGACG TGAAGCTATC CGGCTTCGGG AACTTCATCC TGCATGAGAA ACGGGCACGA
CCCGGGCGGA ATCCGAAGAA TGGGGAGCCG TTCGAGATCA AGGCGCGGCG GGTGGTGACG
TTTCGGGCCA GCCAACTGGT CAGGGAAAGG TGCTAA
 
Protein sequence
MTITKLDLTR HLSDTMGLTA KECAALVNAM FDTIRATLAS GEDVKLSGFG NFILHEKRAR 
PGRNPKNGEP FEIKARRVVT FRASQLVRER C