Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VC0395_A0846 |
Symbol | ihfA |
ID | 5135280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio cholerae O395 |
Kingdom | Bacteria |
Replicon accession | NC_009457 |
Strand | + |
Start bp | 858746 |
End bp | 859042 |
Gene Length | 297 bp |
Protein Length | 98 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640532304 |
Product | integration host factor subunit alpha |
Protein accession | YP_001216792 |
Protein GI | 147673436 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
TIGRFAM ID | [TIGR00987] integration host factor, alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000000000670658 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGCTCA CAAAGGCCGA ATTGGCTGAA GCCCTGTTCG AACAGCTCGG CATGAGCAAG CGGGATGCCA AGGATACGGT TGAGGTGTTT TTTGAAGAAA TTCGTAAAGC ACTCGAAAGT GGCGAACAGG TAAAACTCTC CGGTTTTGGT AATTTTGACC TACGAGATAA AAATGAACGT CCGGGTCGAA ACCCTAAAAC CGGTGAAGAT ATTCCTATTA CCGCTCGACG TGTCGTAACG TTCCGCCCAG GGCAAAAATT GAAAGCCCGT GTCGAGAACA TCAAAGTCGA AAAATAA
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Protein sequence | MALTKAELAE ALFEQLGMSK RDAKDTVEVF FEEIRKALES GEQVKLSGFG NFDLRDKNER PGRNPKTGED IPITARRVVT FRPGQKLKAR VENIKVEK
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