Gene VC0395_A0846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVC0395_A0846 
SymbolihfA 
ID5135280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio cholerae O395 
KingdomBacteria 
Replicon accessionNC_009457 
Strand
Start bp858746 
End bp859042 
Gene Length297 bp 
Protein Length98 aa 
Translation table11 
GC content47% 
IMG OID640532304 
Productintegration host factor subunit alpha 
Protein accessionYP_001216792 
Protein GI147673436 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID[TIGR00987] integration host factor, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000000670658 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCTCA CAAAGGCCGA ATTGGCTGAA GCCCTGTTCG AACAGCTCGG CATGAGCAAG 
CGGGATGCCA AGGATACGGT TGAGGTGTTT TTTGAAGAAA TTCGTAAAGC ACTCGAAAGT
GGCGAACAGG TAAAACTCTC CGGTTTTGGT AATTTTGACC TACGAGATAA AAATGAACGT
CCGGGTCGAA ACCCTAAAAC CGGTGAAGAT ATTCCTATTA CCGCTCGACG TGTCGTAACG
TTCCGCCCAG GGCAAAAATT GAAAGCCCGT GTCGAGAACA TCAAAGTCGA AAAATAA
 
Protein sequence
MALTKAELAE ALFEQLGMSK RDAKDTVEVF FEEIRKALES GEQVKLSGFG NFDLRDKNER 
PGRNPKTGED IPITARRVVT FRPGQKLKAR VENIKVEK