| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1308 |
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| Symbol | |
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| ID | 4482664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 1600998 |
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| End bp | 1601288 |
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| Gene Length | 291 bp |
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| Protein Length | 96 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 639722051 |
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| Product | integration host factor, alpha subunit |
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| Protein accession | YP_865225 |
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| Protein GI | 117924608 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
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| TIGRFAM ID | [TIGR00987] integration host factor, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.110729 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.113899 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCATGA CCAAAGCGGA TATCGTTCAG ACTGTTTACC ATCGGCTTGG TCTGTCCAAG
AAAGAGTCTG CTGACGTCGT GGAGTCGGTT TTTGAGCTTA TCCGCAGCCA ACTGGAAAGT
GGTGAGCCTG TTAAGATCTC CGGCTTTGGT GGCTTCAGTA TACGGGATAA AAAACCCCGC
CAGGGTCGCA ACCCAAAAAC AGGGGAAGAT GTGGAGATAT CAGCGCGCCG CGTTGTAACT
TTCAAGGCCA GCCAGATCCT GTTGGATCGT GTGAATAAGG GCCCGAGCTG A
|
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| Protein sequence | MTMTKADIVQ TVYHRLGLSK KESADVVESV FELIRSQLES GEPVKISGFG GFSIRDKKPR
QGRNPKTGED VEISARRVVT FKASQILLDR VNKGPS
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