More than 300 homologs were found in PanDaTox collection
for query gene Francci3_0939 on replicon NC_007777
Organism: Frankia sp. CcI3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007777  Francci3_0939  acyl-CoA dehydrogenase-like  100 
 
 
392 aa  794    Frankia sp. CcI3  Bacteria  normal  0.0130462  normal  0.579337 
 
 
-
 
NC_009921  Franean1_5603  acyl-CoA dehydrogenase domain-containing protein  79.74 
 
 
462 aa  637    Frankia sp. EAN1pec  Bacteria  normal  0.447806  hitchhiker  0.00691492 
 
 
-
 
NC_013510  Tcur_3342  acyl-CoA dehydrogenase domain protein  46.09 
 
 
393 aa  322  6e-87  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_1367  acyl-CoA dehydrogenase domain protein  43.5 
 
 
400 aa  310  2e-83  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_2091  acyl-CoA dehydrogenase domain-containing protein  44.36 
 
 
381 aa  308  1.0000000000000001e-82  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_1481  acyl-CoA dehydrogenase domain-containing protein  42.67 
 
 
382 aa  292  5e-78  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_009565  TBFG_11963  acyl-CoA dehydrogenase fadE17  40.35 
 
 
409 aa  288  1e-76  Mycobacterium tuberculosis F11  Bacteria  normal  0.0444584  normal  0.860383 
 
 
-
 
NC_009565  TBFG_13593  acyl-CoA dehydrogenase fadE30  41.97 
 
 
385 aa  288  1e-76  Mycobacterium tuberculosis F11  Bacteria  hitchhiker  0.000404245  normal  0.123125 
 
 
-
 
NC_009077  Mjls_5078  acyl-CoA dehydrogenase domain-containing protein  42.23 
 
 
384 aa  287  2e-76  Mycobacterium sp. JLS  Bacteria  normal  normal  0.292219 
 
 
-
 
NC_008146  Mmcs_4693  acyl-CoA dehydrogenase-like protein  42.23 
 
 
384 aa  287  2e-76  Mycobacterium sp. MCS  Bacteria  normal  0.311916  n/a   
 
 
-
 
NC_008705  Mkms_4779  acyl-CoA dehydrogenase domain-containing protein  42.23 
 
 
384 aa  287  2e-76  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_013441  Gbro_3995  acyl-CoA dehydrogenase domain protein  40.9 
 
 
419 aa  286  5.999999999999999e-76  Gordonia bronchialis DSM 43247  Bacteria  normal  0.30356  n/a   
 
 
-
 
NC_014158  Tpau_3835  acyl-CoA dehydrogenase domain protein  43.16 
 
 
382 aa  285  7e-76  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_2814  acyl-CoA dehydrogenase domain-containing protein  44.16 
 
 
386 aa  285  9e-76  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00382252 
 
 
-
 
NC_009511  Swit_3633  acyl-CoA dehydrogenase domain-containing protein  41.28 
 
 
393 aa  285  1.0000000000000001e-75  Sphingomonas wittichii RW1  Bacteria  normal  normal  0.752817 
 
 
-
 
NC_008048  Sala_0875  acyl-CoA dehydrogenase-like protein  41.94 
 
 
383 aa  281  2e-74  Sphingopyxis alaskensis RB2256  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_2813  acyl-CoA dehydrogenase domain-containing protein  40.15 
 
 
380 aa  280  2e-74  Salinispora tropica CNB-440  Bacteria  normal  0.249465  normal 
 
 
-
 
NC_008726  Mvan_5285  acyl-CoA dehydrogenase domain-containing protein  41.41 
 
 
384 aa  280  3e-74  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.301453 
 
 
-
 
NC_009380  Strop_2615  acyl-CoA dehydrogenase domain-containing protein  43.12 
 
 
386 aa  279  7e-74  Salinispora tropica CNB-440  Bacteria  normal  0.766837  normal 
 
 
-
 
NC_009427  Saro_3762  acyl-CoA dehydrogenase domain-containing protein  40.61 
 
 
392 aa  276  4e-73  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.315428  n/a   
 
 
-
 
NC_013739  Cwoe_0960  acyl-CoA dehydrogenase domain protein  41.28 
 
 
378 aa  273  4.0000000000000004e-72  Conexibacter woesei DSM 14684  Bacteria  normal  0.489478  normal 
 
 
-
 
NC_009901  Spea_2176  acyl-CoA dehydrogenase domain-containing protein  36.71 
 
 
396 aa  273  4.0000000000000004e-72  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_2767  acyl-CoA dehydrogenase domain-containing protein  42.48 
 
 
378 aa  271  1e-71  Nocardioides sp. JS614  Bacteria  normal  0.259881  n/a   
 
 
-
 
NC_009427  Saro_3606  acyl-CoA dehydrogenase domain-containing protein  39.39 
 
 
390 aa  267  2e-70  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  0.873151  n/a   
 
 
-
 
NC_008726  Mvan_4006  acyl-CoA dehydrogenase domain-containing protein  37.87 
 
 
419 aa  266  7e-70  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_007511  Bcep18194_B1442  Acyl-CoA dehydrogenase  38.82 
 
 
400 aa  265  1e-69  Burkholderia sp. 383  Bacteria  normal  0.100944  normal 
 
 
-
 
NC_008699  Noca_0803  acyl-CoA dehydrogenase domain-containing protein  40.92 
 
 
378 aa  265  1e-69  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_2574  acyl-CoA dehydrogenase domain-containing protein  37.63 
 
 
385 aa  261  2e-68  Mycobacterium sp. JLS  Bacteria  normal  0.762648  normal 
 
 
-
 
NC_013510  Tcur_4613  acyl-CoA dehydrogenase domain protein  40.1 
 
 
394 aa  259  8e-68  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_1910  acyl-CoA dehydrogenase domain protein  36.68 
 
 
414 aa  258  1e-67  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009511  Swit_3628  acyl-CoA dehydrogenase domain-containing protein  38.21 
 
 
383 aa  258  1e-67  Sphingomonas wittichii RW1  Bacteria  normal  0.373351  normal  0.221875 
 
 
-
 
NC_007511  Bcep18194_B1437  Acyl-CoA dehydrogenase  38.48 
 
 
389 aa  257  2e-67  Burkholderia sp. 383  Bacteria  normal  0.0732196  normal 
 
 
-
 
NC_009427  Saro_3756  acyl-CoA dehydrogenase domain-containing protein  38.97 
 
 
381 aa  255  1.0000000000000001e-66  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_1805  acyl-CoA dehydrogenase domain-containing protein  38.37 
 
 
397 aa  254  2.0000000000000002e-66  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.337752  normal 
 
 
-
 
NC_010338  Caul_3426  acyl-CoA dehydrogenase domain-containing protein  38.83 
 
 
407 aa  254  3e-66  Caulobacter sp. K31  Bacteria  normal  0.751929  normal  0.216447 
 
 
-
 
NC_013131  Caci_8743  acyl-CoA dehydrogenase domain protein  38.97 
 
 
404 aa  252  1e-65  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.316323 
 
 
-
 
NC_007778  RPB_1689  Acyl-CoA dehydrogenase-like  36.2 
 
 
415 aa  252  1e-65  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal  0.777163 
 
 
-
 
NC_007958  RPD_3605  acyl-CoA dehydrogenase-like  36.75 
 
 
415 aa  252  1e-65  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.75816  normal 
 
 
-
 
NC_007347  Reut_A1569  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  38.21 
 
 
403 aa  250  2e-65  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_1909  acyl-CoA dehydrogenase domain protein  37 
 
 
415 aa  249  5e-65  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.337795  n/a   
 
 
-
 
NC_009901  Spea_2159  acyl-CoA dehydrogenase domain-containing protein  36.09 
 
 
385 aa  249  5e-65  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A1563  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region:Acyl-CoA dehydrogenase, N-terminal  37.88 
 
 
388 aa  249  6e-65  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_1688  Acyl-CoA dehydrogenase-like  35.59 
 
 
415 aa  248  1e-64  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.78575  normal  0.535517 
 
 
-
 
NC_014158  Tpau_3838  acyl-CoA dehydrogenase domain protein  39.65 
 
 
385 aa  245  9.999999999999999e-64  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_3604  acyl-CoA dehydrogenase-like  35.44 
 
 
414 aa  244  1.9999999999999999e-63  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0502899  normal 
 
 
-
 
NC_011004  Rpal_1429  acyl-CoA dehydrogenase domain protein  37.72 
 
 
398 aa  244  3e-63  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_7117  putative acyl-CoA dehydrogenase  37.06 
 
 
414 aa  243  3e-63  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.691802 
 
 
-
 
NC_007651  BTH_I1078  acyl-CoA dehydrogenase domain-containing protein  37.62 
 
 
398 aa  243  3.9999999999999997e-63  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_4582  acyl-CoA dehydrogenase domain-containing protein  39.39 
 
 
418 aa  243  5e-63  Frankia sp. EAN1pec  Bacteria  normal  0.770197  normal  0.671641 
 
 
-
 
NC_010508  Bcenmc03_2256  acyl-CoA dehydrogenase domain-containing protein  37.84 
 
 
398 aa  242  6e-63  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_1620  acyl-CoA dehydrogenase-like  37.84 
 
 
398 aa  242  7e-63  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_2232  acyl-CoA dehydrogenase domain-containing protein  37.84 
 
 
398 aa  242  7e-63  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_007510  Bcep18194_A5560  Acyl-CoA dehydrogenase  37.84 
 
 
398 aa  242  7.999999999999999e-63  Burkholderia sp. 383  Bacteria  normal  normal  0.198235 
 
 
-
 
NC_009719  Plav_0499  acyl-CoA dehydrogenase domain-containing protein  37.86 
 
 
452 aa  242  7.999999999999999e-63  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.504662  normal 
 
 
-
 
NC_009485  BBta_7116  putative acyl-CoA dehydrogenase  35.95 
 
 
415 aa  242  9e-63  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_1872  acyl-CoA dehydrogenase domain-containing protein  36.88 
 
 
397 aa  242  1e-62  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.364161 
 
 
-
 
NC_007778  RPB_1238  Acyl-CoA dehydrogenase-like  37.47 
 
 
398 aa  241  1e-62  Rhodopseudomonas palustris HaA2  Bacteria  normal  normal 
 
 
-
 
NC_012791  Vapar_1274  acyl-CoA dehydrogenase domain protein  36.88 
 
 
393 aa  241  1e-62  Variovorax paradoxus S110  Bacteria  normal  0.409233  n/a   
 
 
-
 
NC_013739  Cwoe_2351  acyl-CoA dehydrogenase domain protein  39.03 
 
 
378 aa  241  2e-62  Conexibacter woesei DSM 14684  Bacteria  normal  0.188906  normal  0.0134667 
 
 
-
 
NC_007348  Reut_B4790  Acyl-CoA dehydrogenase, C-terminal:Acyl-CoA dehydrogenase, central region  35.51 
 
 
395 aa  241  2e-62  Ralstonia eutropha JMP134  Bacteria  normal  0.103572  n/a   
 
 
-
 
NC_009074  BURPS668_1307  acyl-CoA dehydrogenase  37.01 
 
 
398 aa  241  2e-62  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007434  BURPS1710b_1453  putative acyl-CoA dehydrogenase family protein  37.01 
 
 
398 aa  240  2.9999999999999997e-62  Burkholderia pseudomallei 1710b  Bacteria  normal  n/a   
 
 
-
 
NC_009076  BURPS1106A_1316  acyl-CoA dehydrogenase  37.01 
 
 
398 aa  240  2.9999999999999997e-62  Burkholderia pseudomallei 1106a  Bacteria  normal  0.23333  n/a   
 
 
-
 
NC_007958  RPD_4007  acyl-CoA dehydrogenase-like  37.22 
 
 
398 aa  240  2.9999999999999997e-62  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_008785  BMASAVP1_A1147  acyl-CoA dehydrogenase  37.01 
 
 
398 aa  240  2.9999999999999997e-62  Burkholderia mallei SAVP1  Bacteria  normal  0.383138  n/a   
 
 
-
 
NC_008836  BMA10229_A0720  acyl-CoA dehydrogenase domain-containing protein  37.01 
 
 
398 aa  240  2.9999999999999997e-62  Burkholderia mallei NCTC 10229  Bacteria  normal  n/a   
 
 
-
 
NC_009080  BMA10247_0430  acyl-CoA dehydrogenase  37.01 
 
 
398 aa  240  2.9999999999999997e-62  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_2198  acyl-CoA dehydrogenase-like  35.41 
 
 
413 aa  239  4e-62  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.659729  normal 
 
 
-
 
NC_008726  Mvan_5287  acyl-CoA dehydrogenase domain-containing protein  38.46 
 
 
374 aa  239  5e-62  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.66157  normal  0.272331 
 
 
-
 
NC_010551  BamMC406_2149  acyl-CoA dehydrogenase domain-containing protein  37.59 
 
 
398 aa  239  5e-62  Burkholderia ambifaria MC40-6  Bacteria  normal  0.324611  normal  0.360268 
 
 
-
 
NC_010551  BamMC406_2795  acyl-CoA dehydrogenase domain-containing protein  38.02 
 
 
398 aa  239  5.999999999999999e-62  Burkholderia ambifaria MC40-6  Bacteria  normal  0.174567  normal 
 
 
-
 
NC_010333  Caul_5300  acyl-CoA dehydrogenase domain-containing protein  38.13 
 
 
402 aa  239  8e-62  Caulobacter sp. K31  Bacteria  normal  normal  0.712748 
 
 
-
 
NC_008390  Bamb_2270  acyl-CoA dehydrogenase domain-containing protein  37.59 
 
 
398 aa  238  1e-61  Burkholderia ambifaria AMMD  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_2706  acyl-CoA dehydrogenase domain protein  37.06 
 
 
383 aa  237  2e-61  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0953492  n/a   
 
 
-
 
NC_008048  Sala_1104  acyl-CoA dehydrogenase-like protein  37.59 
 
 
397 aa  237  2e-61  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.289526  normal 
 
 
-
 
NC_008390  Bamb_2933  acyl-CoA dehydrogenase domain-containing protein  37.87 
 
 
398 aa  238  2e-61  Burkholderia ambifaria AMMD  Bacteria  normal  0.26502  n/a   
 
 
-
 
NC_009719  Plav_1060  acyl-CoA dehydrogenase domain-containing protein  37.13 
 
 
397 aa  237  3e-61  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.596056  normal 
 
 
-
 
NC_009719  Plav_1807  acyl-CoA dehydrogenase domain-containing protein  35.63 
 
 
399 aa  236  4e-61  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.167167  normal 
 
 
-
 
NC_010508  Bcenmc03_2889  acyl-CoA dehydrogenase domain-containing protein  38.24 
 
 
402 aa  234  2.0000000000000002e-60  Burkholderia cenocepacia MC0-3  Bacteria  normal  0.222228  normal 
 
 
-
 
NC_010084  Bmul_1045  acyl-CoA dehydrogenase domain-containing protein  36.59 
 
 
398 aa  234  2.0000000000000002e-60  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0868009  normal  0.228879 
 
 
-
 
NC_009719  Plav_0965  acyl-CoA dehydrogenase domain-containing protein  37.22 
 
 
409 aa  234  2.0000000000000002e-60  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal 
 
 
-
 
NC_010682  Rpic_2197  acyl-CoA dehydrogenase domain protein  35.15 
 
 
398 aa  234  3e-60  Ralstonia pickettii 12J  Bacteria  normal  normal  0.34264 
 
 
-
 
NC_008752  Aave_3439  acyl-CoA dehydrogenase domain-containing protein  36.25 
 
 
401 aa  233  3e-60  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.154359 
 
 
-
 
NC_008146  Mmcs_4695  acyl-CoA dehydrogenase-like protein  37.06 
 
 
389 aa  233  4.0000000000000004e-60  Mycobacterium sp. MCS  Bacteria  normal  0.0252616  n/a   
 
 
-
 
NC_008705  Mkms_4781  acyl-CoA dehydrogenase domain-containing protein  37.06 
 
 
389 aa  233  4.0000000000000004e-60  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008060  Bcen_2264  acyl-CoA dehydrogenase-like  37.99 
 
 
402 aa  232  7.000000000000001e-60  Burkholderia cenocepacia AU 1054  Bacteria  normal  0.0525732  n/a   
 
 
-
 
NC_008542  Bcen2424_2878  acyl-CoA dehydrogenase domain-containing protein  37.99 
 
 
402 aa  232  7.000000000000001e-60  Burkholderia cenocepacia HI2424  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_5374  acyl-CoA dehydrogenase domain-containing protein  35.56 
 
 
393 aa  232  1e-59  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.988839 
 
 
-
 
NC_012856  Rpic12D_1874  acyl-CoA dehydrogenase domain protein  34.56 
 
 
398 aa  232  1e-59  Ralstonia pickettii 12D  Bacteria  normal  normal  0.400233 
 
 
-
 
NC_003295  RSc2045  putative acyl-CoA dehydrogenase oxidoreductase protein  35.54 
 
 
398 aa  231  2e-59  Ralstonia solanacearum GMI1000  Bacteria  normal  0.257916  normal  0.141872 
 
 
-
 
NC_007802  Jann_1503  acyl-CoA dehydrogenase-like  36.97 
 
 
393 aa  231  2e-59  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_009511  Swit_1604  acyl-CoA dehydrogenase domain-containing protein  36.34 
 
 
432 aa  231  2e-59  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_5080  acyl-CoA dehydrogenase domain-containing protein  36.8 
 
 
389 aa  231  2e-59  Mycobacterium sp. JLS  Bacteria  normal  normal  0.302814 
 
 
-
 
NC_009077  Mjls_4096  acyl-CoA dehydrogenase domain-containing protein  38.94 
 
 
396 aa  230  3e-59  Mycobacterium sp. JLS  Bacteria  normal  0.0624184  normal 
 
 
-
 
NC_009077  Mjls_4064  acyl-CoA dehydrogenase domain-containing protein  38.06 
 
 
390 aa  230  3e-59  Mycobacterium sp. JLS  Bacteria  normal  normal  0.725849 
 
 
-
 
NC_010681  Bphyt_1362  acyl-CoA dehydrogenase domain protein  36.88 
 
 
398 aa  230  3e-59  Burkholderia phytofirmans PsJN  Bacteria  normal  0.0703001  decreased coverage  0.000728046 
 
 
-
 
NC_008347  Mmar10_2529  acyl-CoA dehydrogenase domain-containing protein  35.48 
 
 
393 aa  230  3e-59  Maricaulis maris MCS10  Bacteria  normal  normal 
 
 
-
 
NC_008752  Aave_4313  acyl-CoA dehydrogenase domain-containing protein  36.21 
 
 
402 aa  229  7e-59  Acidovorax citrulli AAC00-1  Bacteria  normal  0.168466  normal  0.322728 
 
 
-
 
NC_009719  Plav_2205  acyl-CoA dehydrogenase domain-containing protein  36.36 
 
 
397 aa  228  1e-58  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.0291092  normal 
 
 
-
 
NC_007973  Rmet_0944  acyl-CoA dehydrogenase-like protein  36.21 
 
 
400 aa  228  1e-58  Cupriavidus metallidurans CH34  Bacteria  normal  0.671788  normal 
 
 
-
 
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