More than 300 homologs were found in PanDaTox collection
for query gene Csal_2135 on replicon NC_007963
Organism: Chromohalobacter salexigens DSM 3043



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007963  Csal_2135  Crp/FNR family transcriptional regulator  100 
 
 
269 aa  550  1e-155  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.0632673  n/a   
 
 
-
 
NC_007492  Pfl01_1811  Crp/FNR family transcriptional regulator  46.88 
 
 
244 aa  185  6e-46  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_002947  PP_4265  transcriptional regulator Anr  45.98 
 
 
244 aa  183  3e-45  Pseudomonas putida KT2440  Bacteria  normal  0.880812  normal 
 
 
-
 
NC_009512  Pput_1603  CRP/FNR family transcriptional regulator  45.98 
 
 
244 aa  183  3e-45  Pseudomonas putida F1  Bacteria  normal  normal  0.138297 
 
 
-
 
NC_009654  Mmwyl1_2233  CRP/FNR family transcriptional regulator  42.45 
 
 
253 aa  182  4.0000000000000006e-45  Marinomonas sp. MWYL1  Bacteria  normal  0.0375344  normal  0.791743 
 
 
-
 
NC_011205  SeD_A1673  fumarate/nitrate reduction transcriptional regulator  42.67 
 
 
250 aa  182  5.0000000000000004e-45  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  0.349784  normal  0.0983377 
 
 
-
 
NC_011083  SeHA_C1845  fumarate/nitrate reduction transcriptional regulator  42.67 
 
 
250 aa  182  5.0000000000000004e-45  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.918423  normal 
 
 
-
 
NC_011080  SNSL254_A1783  fumarate/nitrate reduction transcriptional regulator  42.67 
 
 
250 aa  182  5.0000000000000004e-45  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal  0.251439 
 
 
-
 
NC_011149  SeAg_B1491  fumarate/nitrate reduction transcriptional regulator  42.67 
 
 
250 aa  182  5.0000000000000004e-45  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.0202312  n/a   
 
 
-
 
NC_011094  SeSA_A1785  fumarate/nitrate reduction transcriptional regulator  42.67 
 
 
250 aa  182  5.0000000000000004e-45  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  0.377507  normal  0.141635 
 
 
-
 
NC_010501  PputW619_3583  Crp/FNR family transcriptional regulator  45.98 
 
 
244 aa  182  6e-45  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_010322  PputGB1_3830  Crp/FNR family transcriptional regulator  45.98 
 
 
244 aa  182  6e-45  Pseudomonas putida GB-1  Bacteria  normal  normal  0.525453 
 
 
-
 
CP001637  EcDH1_2311  transcriptional regulator, Crp/Fnr family  42.24 
 
 
250 aa  180  2e-44  Escherichia coli DH1  Bacteria  normal  0.144598  n/a   
 
 
-
 
NC_009801  EcE24377A_1546  fumarate/nitrate reduction transcriptional regulator  42.24 
 
 
250 aa  180  2e-44  Escherichia coli E24377A  Bacteria  normal  n/a   
 
 
-
 
NC_009800  EcHS_A1450  fumarate/nitrate reduction transcriptional regulator  42.24 
 
 
250 aa  180  2e-44  Escherichia coli HS  Bacteria  normal  n/a   
 
 
-
 
NC_010658  SbBS512_E1575  fumarate/nitrate reduction transcriptional regulator  42.24 
 
 
250 aa  180  2e-44  Shigella boydii CDC 3083-94  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_2291  fumarate/nitrate reduction transcriptional regulator  42.24 
 
 
250 aa  180  2e-44  Escherichia coli ATCC 8739  Bacteria  normal  normal 
 
 
-
 
NC_010498  EcSMS35_1788  fumarate/nitrate reduction transcriptional regulator  42.24 
 
 
250 aa  180  2e-44  Escherichia coli SMS-3-5  Bacteria  normal  0.765276  normal 
 
 
-
 
NC_009656  PSPA7_3788  transcriptional regulator Anr  44 
 
 
244 aa  179  2.9999999999999997e-44  Pseudomonas aeruginosa PA7  Bacteria  normal  0.620164  n/a   
 
 
-
 
NC_008463  PA14_44490  transcriptional regulator Anr  44 
 
 
244 aa  179  2.9999999999999997e-44  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal  0.793348 
 
 
-
 
NC_009439  Pmen_2615  CRP/FNR family transcriptional regulator  45.54 
 
 
244 aa  179  4e-44  Pseudomonas mendocina ymp  Bacteria  hitchhiker  0.00240538  normal  0.855877 
 
 
-
 
NC_011312  VSAL_I1571  fumarate/nitrate reduction transcriptional regulator  42.04 
 
 
250 aa  179  4.999999999999999e-44  Aliivibrio salmonicida LFI1238  Bacteria  normal  0.75505  n/a   
 
 
-
 
NC_012560  Avin_19910  Fnr-like negative transcriptional regulator of CydAB  44.3 
 
 
244 aa  179  5.999999999999999e-44  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_011353  ECH74115_1981  fumarate/nitrate reduction transcriptional regulator  41.81 
 
 
250 aa  178  7e-44  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal  0.320226 
 
 
-
 
NC_009436  Ent638_1853  fumarate/nitrate reduction transcriptional regulator  41.81 
 
 
250 aa  177  1e-43  Enterobacter sp. 638  Bacteria  normal  normal  0.755428 
 
 
-
 
NC_004578  PSPTO_1991  transcriptional activator Anr  45.09 
 
 
244 aa  177  2e-43  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.695719  n/a   
 
 
-
 
NC_007005  Psyr_3425  cyclic nucleotide-binding: regulatory protein, Crp  44.64 
 
 
244 aa  177  2e-43  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.0533041 
 
 
-
 
NC_012880  Dd703_1864  fumarate/nitrate reduction transcriptional regulator  41.15 
 
 
250 aa  176  4e-43  Dickeya dadantii Ech703  Bacteria  normal  0.856056  n/a   
 
 
-
 
NC_012912  Dd1591_2081  fumarate/nitrate reduction transcriptional regulator  41.56 
 
 
250 aa  174  9.999999999999999e-43  Dickeya zeae Ech1591  Bacteria  normal  0.0488524  n/a   
 
 
-
 
NC_012917  PC1_2105  fumarate/nitrate reduction transcriptional regulator  41.99 
 
 
248 aa  174  9.999999999999999e-43  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0944449  n/a   
 
 
-
 
NC_013421  Pecwa_2398  fumarate/nitrate reduction transcriptional regulator  41.56 
 
 
248 aa  174  9.999999999999999e-43  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_009783  VIBHAR_02295  fumarate/nitrate reduction transcriptional regulator  41.15 
 
 
248 aa  172  5e-42  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_010159  YpAngola_A2293  fumarate/nitrate reduction transcriptional regulator  41.15 
 
 
250 aa  172  5e-42  Yersinia pestis Angola  Bacteria  normal  normal 
 
 
-
 
NC_009708  YpsIP31758_1833  fumarate/nitrate reduction transcriptional regulator  41.15 
 
 
250 aa  172  5e-42  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_1944  fumarate/nitrate reduction transcriptional regulator  41.15 
 
 
250 aa  172  5e-42  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.755264  n/a   
 
 
-
 
NC_013456  VEA_003475  fumarate and nitrate reduction regulatory protein  41.15 
 
 
248 aa  170  2e-41  Vibrio sp. Ex25  Bacteria  normal  0.292896  n/a   
 
 
-
 
NC_008709  Ping_0931  fumarate/nitrate reduction transcriptional regulator  40.71 
 
 
249 aa  170  2e-41  Psychromonas ingrahamii 37  Bacteria  normal  normal  0.896198 
 
 
-
 
NC_009832  Spro_2582  fumarate/nitrate reduction transcriptional regulator  40.27 
 
 
254 aa  170  2e-41  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_0876  Crp/FNR family transcriptional regulator  43.22 
 
 
253 aa  169  3e-41  Chromohalobacter salexigens DSM 3043  Bacteria  hitchhiker  0.0000121732  n/a   
 
 
-
 
NC_011901  Tgr7_0212  putative transcriptional regulator, Crp/Fnr family  43.24 
 
 
254 aa  169  3e-41  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_007954  Sden_1843  fumarate/nitrate reduction transcriptional regulator  39.46 
 
 
250 aa  168  1e-40  Shewanella denitrificans OS217  Bacteria  normal  0.0177159  n/a   
 
 
-
 
NC_009457  VC0395_A1045  fumarate/nitrate reduction transcriptional regulator  40.77 
 
 
250 aa  167  1e-40  Vibrio cholerae O395  Bacteria  normal  0.18077  n/a   
 
 
-
 
NC_009092  Shew_1993  fumarate/nitrate reduction transcriptional regulator  37.14 
 
 
249 aa  166  2.9999999999999998e-40  Shewanella loihica PV-4  Bacteria  normal  0.238952  normal 
 
 
-
 
NC_008340  Mlg_0319  Crp/FNR family transcriptional regulator  43.24 
 
 
262 aa  166  4e-40  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_008309  HS_0878  fumarate/nitrate reduction transcriptional regulator  39.82 
 
 
257 aa  164  2.0000000000000002e-39  Haemophilus somnus 129PT  Bacteria  normal  0.0364978  n/a   
 
 
-
 
NC_008345  Sfri_2018  fumarate/nitrate reduction transcriptional regulator  38.84 
 
 
252 aa  163  3e-39  Shewanella frigidimarina NCIMB 400  Bacteria  normal  0.831368  n/a   
 
 
-
 
NC_009665  Shew185_2162  fumarate/nitrate reduction transcriptional regulator  38.77 
 
 
250 aa  161  1e-38  Shewanella baltica OS185  Bacteria  normal  0.914647  n/a   
 
 
-
 
NC_011663  Sbal223_2222  fumarate/nitrate reduction transcriptional regulator  38.77 
 
 
250 aa  161  1e-38  Shewanella baltica OS223  Bacteria  decreased coverage  0.00000942023  normal  0.178468 
 
 
-
 
NC_009997  Sbal195_2212  fumarate/nitrate reduction transcriptional regulator  38.77 
 
 
250 aa  161  1e-38  Shewanella baltica OS195  Bacteria  hitchhiker  0.00299596  normal  0.266977 
 
 
-
 
NC_009035  Sbal_4495  fumarate/nitrate reduction transcriptional regulator  38.77 
 
 
250 aa  161  1e-38  Shewanella baltica OS155  Bacteria  n/a    n/a   
 
 
-
 
NC_009052  Sbal_2209  fumarate/nitrate reduction transcriptional regulator  38.77 
 
 
250 aa  161  1e-38  Shewanella baltica OS155  Bacteria  hitchhiker  0.00613295  n/a   
 
 
-
 
NC_009831  Ssed_2219  fumarate/nitrate reduction transcriptional regulator  37.84 
 
 
249 aa  160  2e-38  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_1951  fumarate/nitrate reduction transcriptional regulator  38.33 
 
 
250 aa  159  3e-38  Shewanella putrefaciens CN-32  Bacteria  normal  0.80493  n/a   
 
 
-
 
NC_003910  CPS_1987  fumarate/nitrate reduction transcriptional regulator  37.61 
 
 
239 aa  159  4e-38  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_2222  fumarate/nitrate reduction transcriptional regulator  37.84 
 
 
250 aa  159  4e-38  Shewanella pealeana ATCC 700345  Bacteria  normal  0.0665535  n/a   
 
 
-
 
NC_010506  Swoo_2417  fumarate/nitrate reduction transcriptional regulator  35.92 
 
 
249 aa  158  1e-37  Shewanella woodyi ATCC 51908  Bacteria  normal  0.0646393  decreased coverage  0.000000159166 
 
 
-
 
NC_007912  Sde_1464  transcriptional activator Anr  36.16 
 
 
244 aa  157  2e-37  Saccharophagus degradans 2-40  Bacteria  normal  normal 
 
 
-
 
NC_008322  Shewmr7_1961  fumarate/nitrate reduction transcriptional regulator  37.89 
 
 
250 aa  156  4e-37  Shewanella sp. MR-7  Bacteria  normal  hitchhiker  0.00754009 
 
 
-
 
NC_008577  Shewana3_2115  fumarate/nitrate reduction transcriptional regulator  37.89 
 
 
250 aa  155  5.0000000000000005e-37  Shewanella sp. ANA-3  Bacteria  normal  0.508722  normal  0.0650668 
 
 
-
 
NC_008321  Shewmr4_2014  fumarate/nitrate reduction transcriptional regulator  37.89 
 
 
250 aa  155  5.0000000000000005e-37  Shewanella sp. MR-4  Bacteria  normal  decreased coverage  0.00000000422436 
 
 
-
 
NC_008700  Sama_1799  fumarate/nitrate reduction transcriptional regulator  37 
 
 
250 aa  155  7e-37  Shewanella amazonensis SB2B  Bacteria  normal  0.417815  normal  0.180258 
 
 
-
 
NC_004347  SO_2356  fumarate/nitrate reduction transcriptional regulator  37.44 
 
 
254 aa  152  4e-36  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_010552  BamMC406_4280  Crp/FNR family transcriptional regulator  38.46 
 
 
257 aa  152  5e-36  Burkholderia ambifaria MC40-6  Bacteria  normal  normal  0.0900166 
 
 
-
 
NC_010087  Bmul_5904  Crp/FNR family transcriptional regulator  37.82 
 
 
257 aa  151  1e-35  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.379633  normal  0.222249 
 
 
-
 
NC_010557  BamMC406_6195  Crp/FNR family transcriptional regulator  38.03 
 
 
257 aa  151  1e-35  Burkholderia ambifaria MC40-6  Bacteria  normal  0.107166  normal  0.295507 
 
 
-
 
NC_008391  Bamb_3812  Crp/FNR family transcriptional regulator  38.03 
 
 
257 aa  151  1e-35  Burkholderia ambifaria AMMD  Bacteria  normal  0.279241  normal  0.577974 
 
 
-
 
NC_010625  Bphy_5811  Crp/FNR family transcriptional regulator  38.7 
 
 
266 aa  148  1.0000000000000001e-34  Burkholderia phymatum STM815  Bacteria  normal  normal  0.118405 
 
 
-
 
NC_013889  TK90_0787  transcriptional regulator, Crp/Fnr family  39.62 
 
 
243 aa  146  4.0000000000000006e-34  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal 
 
 
-
 
NC_011138  MADE_02063  transcriptional regulator of aerobic, anaerobic respiration, osmotic balance (CAMP-binding family) protein  38.76 
 
 
222 aa  145  6e-34  Alteromonas macleodii 'Deep ecotype'  Bacteria  hitchhiker  0.00714534  n/a   
 
 
-
 
NC_007948  Bpro_1170  Crp/FNR family transcriptional regulator  35.09 
 
 
274 aa  143  4e-33  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_007974  Rmet_4521  Crp/Fnr family transcriptional regulator  38.46 
 
 
257 aa  142  5e-33  Cupriavidus metallidurans CH34  Bacteria  normal  0.0161618  normal  0.0108643 
 
 
-
 
NC_010515  Bcenmc03_4486  Crp/FNR family transcriptional regulator  36.86 
 
 
248 aa  142  8e-33  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_010552  BamMC406_3149  Crp/FNR family transcriptional regulator  36.1 
 
 
249 aa  142  8e-33  Burkholderia ambifaria MC40-6  Bacteria  normal  normal 
 
 
-
 
NC_007347  Reut_A1147  cyclic nucleotide-binding: regulatory protein, Crp  36.15 
 
 
261 aa  140  9.999999999999999e-33  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007347  Reut_A1217  cyclic nucleotide-binding: regulatory protein, Crp  36.15 
 
 
261 aa  140  9.999999999999999e-33  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_010531  Pnec_1356  transcriptional regulator, Crp/Fnr family  38.14 
 
 
256 aa  140  1.9999999999999998e-32  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal  0.0588975 
 
 
-
 
NC_007511  Bcep18194_B3138  Crp/FNR family transcriptional regulator  37.33 
 
 
248 aa  140  1.9999999999999998e-32  Burkholderia sp. 383  Bacteria  normal  normal 
 
 
-
 
NC_007650  BTH_II1244  Crp/FNR family transcriptional regulator  37.9 
 
 
261 aa  140  1.9999999999999998e-32  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_6315  transcriptional regulator, Crp/Fnr family  36.7 
 
 
403 aa  140  3e-32  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_009078  BURPS1106A_A0037  Crp/FNR family transcriptional regulator  36.89 
 
 
251 aa  140  3e-32  Burkholderia pseudomallei 1106a  Bacteria  normal  n/a   
 
 
-
 
NC_010086  Bmul_5297  Crp/FNR family transcriptional regulator  37.44 
 
 
248 aa  139  3e-32  Burkholderia multivorans ATCC 17616  Bacteria  normal  normal 
 
 
-
 
NC_009075  BURPS668_A0051  cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases  36.89 
 
 
251 aa  140  3e-32  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_006349  BMAA0031  Crp/FNR family transcriptional regulator  36.89 
 
 
251 aa  139  3.9999999999999997e-32  Burkholderia mallei ATCC 23344  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A1540  Crp/FNR family transcriptional regulator  36.84 
 
 
630 aa  139  3.9999999999999997e-32  Burkholderia pseudomallei 1710b  Bacteria  normal  0.18142  n/a   
 
 
-
 
NC_009079  BMA10247_A0037  Crp/FNR family transcriptional regulator  36.89 
 
 
251 aa  139  3.9999999999999997e-32  Burkholderia mallei NCTC 10247  Bacteria  normal  0.284481  n/a   
 
 
-
 
NC_008784  BMASAVP1_1184  Crp/FNR family transcriptional regulator  36.89 
 
 
251 aa  139  3.9999999999999997e-32  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_1464  Crp/FNR family transcriptional regulator  36.89 
 
 
251 aa  139  3.9999999999999997e-32  Burkholderia mallei NCTC 10229  Bacteria  normal  0.855917  n/a   
 
 
-
 
NC_008391  Bamb_5008  Crp/FNR family transcriptional regulator  35.68 
 
 
249 aa  139  3.9999999999999997e-32  Burkholderia ambifaria AMMD  Bacteria  normal  normal 
 
 
-
 
NC_007650  BTH_II0035  Crp/FNR family transcriptional regulator  36.89 
 
 
251 aa  139  4.999999999999999e-32  Burkholderia thailandensis E264  Bacteria  normal  n/a   
 
 
-
 
NC_008061  Bcen_5122  Crp/FNR family transcriptional regulator  36.44 
 
 
248 aa  139  4.999999999999999e-32  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008781  Pnap_0792  CRP/FNR family transcriptional regulator  35.81 
 
 
262 aa  139  4.999999999999999e-32  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.328451  normal 
 
 
-
 
NC_008543  Bcen2424_5737  Crp/FNR family transcriptional regulator  36.44 
 
 
248 aa  139  4.999999999999999e-32  Burkholderia cenocepacia HI2424  Bacteria  normal  normal  0.188641 
 
 
-
 
NC_009075  BURPS668_A1636  Crp/FNR family transcriptional regulator  36.53 
 
 
259 aa  139  7e-32  Burkholderia pseudomallei 668  Bacteria  normal  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0129  Crp/FNR family transcriptional regulator  36.53 
 
 
259 aa  138  7.999999999999999e-32  Burkholderia pseudomallei 1710b  Bacteria  normal  0.300797  n/a   
 
 
-
 
NC_007492  Pfl01_3345  Crp/FNR family transcriptional regulator  37.78 
 
 
247 aa  138  7.999999999999999e-32  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.797997  normal 
 
 
-
 
NC_009078  BURPS1106A_A1554  Crp/FNR family transcriptional regulator  36.53 
 
 
259 aa  138  7.999999999999999e-32  Burkholderia pseudomallei 1106a  Bacteria  normal  0.796955  n/a   
 
 
-
 
NC_002947  PP_3287  Crp/FNR family transcriptional regulator  37.78 
 
 
265 aa  137  1e-31  Pseudomonas putida KT2440  Bacteria  normal  normal 
 
 
-
 
NC_011662  Tmz1t_1288  transcriptional regulator, Crp/Fnr family  35.71 
 
 
246 aa  137  2e-31  Thauera sp. MZ1T  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_1703  Crp/FNR family transcriptional regulator  37.22 
 
 
276 aa  137  3.0000000000000003e-31  Rhodoferax ferrireducens T118  Bacteria  normal  0.0806739  n/a   
 
 
-
 
NC_009379  Pnuc_0460  CRP/FNR family transcriptional regulator  36.17 
 
 
256 aa  136  3.0000000000000003e-31  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
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