26 homologs were found in PanDaTox collection
for query gene Avi_2337 on replicon NC_011989
Organism: Agrobacterium vitis S4



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011989  Avi_2337  Phage tail tape measure protein  100 
 
 		 599 aa  1214    Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
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NC_007925  RPC_1557  Phage tail tape measure protein TP901, core region  34.52 
 
 		 722 aa  182  1e-44  Rhodopseudomonas palustris BisB18  Bacteria  normal  1  normal  0.0138329 
 
 
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NC_011666  Msil_1528  phage tail tape measure protein, TP901 family  31.41 
 
 		 625 aa  168  2.9999999999999998e-40  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
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NC_009667  Oant_1488  TP901 family phage tail tape measure protein  34.39 
 
 		 781 aa  139  2e-31  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  1  n/a   
 
 
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NC_007604  Synpcc7942_0750  Phage tail tape measure protein TP901, core region  30.43 
 
 		 950 aa  133  1.0000000000000001e-29  Synechococcus elongatus PCC 7942  Bacteria  normal  1  normal  0.173353 
 
 
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NC_007964  Nham_3322  Phage tail tape measure protein TP901, core region  30.88 
 
 		 743 aa  132  2.0000000000000002e-29  Nitrobacter hamburgensis X14  Bacteria  normal  0.787637  n/a   
 
 
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NC_009829  Spro_4911  TP901 family phage tail tape measure protein  34.43 
 
 		 814 aa  108  2e-22  Serratia proteamaculans 568  Bacteria  normal  1  normal  0.716595 
 
 
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NC_002977  MCA2914  prophage MuMc02, TP901 family tail tape measure protein  32.87 
 
 		 993 aa  106  1e-21  Methylococcus capsulatus str. Bath  Bacteria  normal  1  n/a   
 
 
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NC_011071  Smal_0884  phage tail tape measure protein, TP901 family  29.43 
 
 		 823 aa  98.2  4e-19  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.0603938  normal  1 
 
 
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NC_004578  PSPTO_3393  tail tape measure protein  29.61 
 
 		 916 aa  87.4  7e-16  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
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NC_010465  YPK_0190  hypothetical protein  28.38 
 
 		 735 aa  85.1  0.000000000000004  Yersinia pseudotuberculosis YPIII  Bacteria  normal  1  n/a   
 
 
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NC_009720  Xaut_4487  TP901 family phage tail tape measure protein  26.07 
 
 		 666 aa  84  0.000000000000008  Xanthobacter autotrophicus Py2  Bacteria  normal  0.108183  normal  0.0686634 
 
 
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NC_010322  PputGB1_1215  TP901 family phage tail tape measure protein  31.11 
 
 		 1314 aa  83.6  0.00000000000001  Pseudomonas putida GB-1  Bacteria  normal  1  hitchhiker  0.00365241 
 
 
-
 
NC_008390  Bamb_1857  pyocin R2_PP, tail length determination protein, putative  23.97 
 
 		 814 aa  78.6  0.0000000000003  Burkholderia ambifaria AMMD  Bacteria  normal  1  n/a   
 
 
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NC_002947  PP_3062  pyocin R2_PP, tail length determination protein, putative  28.89 
 
 		 1089 aa  77.8  0.0000000000005  Pseudomonas putida KT2440  Bacteria  normal  1  normal  0.0911019 
 
 
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NC_011769  DvMF_0743  hypothetical protein  30.43 
 
 		 646 aa  73.2  0.00000000001  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  1 
 
 
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NC_013421  Pecwa_2893  phage tail tape measure protein, TP901 family  25.15 
 
 		 817 aa  64.3  0.000000005  Pectobacterium wasabiae WPP163  Bacteria  normal  0.772057  n/a   
 
 
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NC_009668  Oant_3691  hypothetical protein  33.33 
 
 		 902 aa  57  0.000001  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  1  n/a   
 
 
-
 
NC_012917  PC1_1569  phage tail tape measure protein, TP901 family  26.01 
 
 		 825 aa  54.7  0.000005  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.258062  n/a   
 
 
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NC_011083  SeHA_C4549  putative phage tail protein  25.45 
 
 		 784 aa  50.1  0.0001  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  0.30814  normal  0.374859 
 
 
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NC_011080  SNSL254_A4550  putative phage tail protein  25.45 
 
 		 784 aa  49.3  0.0002  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  0.423372  normal  0.711096 
 
 
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NC_011149  SeAg_B4465  putative phage tail protein  25.45 
 
 		 784 aa  49.3  0.0002  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  1  n/a   
 
 
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NC_013204  Elen_2636  phage tail tape measure protein, TP901 family  22.63 
 
 		 805 aa  47  0.0009  Eggerthella lenta DSM 2243  Bacteria  normal  1  hitchhiker  0.0092648 
 
 
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NC_011773  BCAH820_4374  phage tail tape measure protein, family, core region  25.11 
 
 		 1549 aa  46.6  0.001  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
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NC_009616  Tmel_1449  TP901 family phage tail tape measure protein  23.01 
 
 		 1120 aa  45.1  0.004  Thermosipho melanesiensis BI429  Bacteria  normal  1  n/a   
 
 
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NC_014150  Bmur_2263  phage tail tape measure protein, TP901 family  24.05 
 
 		 1156 aa  43.5  0.01  Brachyspira murdochii DSM 12563  Bacteria  normal  1  n/a   
 
 
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