| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPC_1557 |
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| Symbol | |
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| ID | 3973113 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB18 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007925 |
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| Strand | - |
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| Start bp | 1688229 |
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| End bp | 1690397 |
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| Gene Length | 2169 bp |
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| Protein Length | 722 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637924673 |
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| Product | Phage tail tape measure protein TP901, core region |
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| Protein accession | YP_531438 |
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| Protein GI | 90423068 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01760] phage tail tape measure protein, TP901 family, core region |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0138329 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAATC TCGACGTCGC GCTTCGCCTT CGACTAATCA ATCAGCTTGG TGGCCCCGCG
AAGGACGCCA AGCGGGAGCT TGAAAGCGTC GGTGCCGCGG CCAAGAAACT CGACGGCGCC
AAGGCCGATA AAATCGCCCG CGATCTCGCC AGAACGAAGG CCGAGGCGAA AGGCGCGGAC
GCGGCGCTAC AGAAAGCGGC AGCCGGCGCG AAGCGACTTG ATGGCACGAG TGCGGATCGA
TTGTCCGCCA AATTGCGCAA AGCAACCGCC CATTCGGACC AGCTGGCGCA AAGCCTGCGA
CGCGTACGCA GTGAGGCCAA CTCCGCCGAT CACGCCGGCA AAGTCGATCC CGTTTTCCTG
CAGCGGCAAG GGCGCGGTGG CAGTGCGGTC ATTGCCGGCG GCACCGCGCG GATGATGGGC
GCGGTCGGCG GCGCTTATGC TGGCGTCCGC GCCGTGGGAG CCATCAAGCA GAGCTTTGAA
GACTTCGCCG CGCTGGACCG TCGATTGACG CGACTTGGTA TCACGGCGGA AGCGACCAAG
GCGCAGGTCG ATGGCGCGAC CGTCAAGGTT CGCGAAATCG CACAGCAATA TGCGGTGCCA
GTCGAGGAGG TGCTGAAGGG CCTGGAAGCC CTGGTCACGC AGGGCAAGGA GTTGCCCGAG
GCGCTGGCGA TGATGGATGC GGTGGTCAAG TCGGCGCAGG CGTCTGGCGC AGCCGCGGAG
GACATGTCCA ACTCCGCCGG CGCGATGATG ACCAACCTGA AGCTCAAGGT CGAGGAGTTG
CCGGAGGCGT TCGACAGACT GGCCTATGCG GGTAAGAAGG GCCAGTTCGA ATTGAAGGAC
ATGGCGCGAT ATTTTCCGGA GCTGGCCGCG GCATGGGCCA ACGTCGGGCA GAAGGGAGCC
GACAAGCTGG CCGATCTGGC GGCCGCGACC CAAATCATCC GCAAGGAGGC CGGCACCTCC
GAGAAGACGT TCAACGGCAT CCGTGATCTG CTCGCCAAGA TCAACAGCAC CGATGTGCAG
AACAACTTCA AGAAGATGGG GGTCGATCTC GAAGCCGGGC TGAAGAAGGG CGCCAAGGAA
GGCAAGCCTC TGCTCGATGT GATCACCGAA TTGACCGAAA AAGCGCTCAA GGGCGACATG
GCGAAGCTGC CGCAACTTTT CGGCGAGATC GACTCCCGAA CGGCGATCAG TGCGCTGATC
AACTTGAAGG CGGAGTTTCG ATCGCTGCGC GCGGAGATCC AGACCAAGGC CCTGGGGACG
ATTAATGCAG ACGTCGTCCG CCTCACCGGC GACGCTCGGG CATCGATCGA CAAGCTTGCT
AACGCTTGGT CCGCTGCGGG AACTGCGGTC GGAAAATTCG TGGCCGAGGC GACGCCGGCT
GTCGGCATTC TCGAAAAACT CTCGCGCGGC ATCGATAGCG CACGAGAGTA TATGTCCGGT
GACAAAAAGG ATGATCCCAA GAAGGACGCT CCCCGAGTCG ACGAGCCCGC TGGGCCAAAA
TCGCAGTTTT CCGGCCGCAT GCAGAGCTAC GAGCACGCAC GCGCCACCCG CGCGGCCCTC
AATGCCAGGC GGCCCAAGCT GTCGGACTTC TCGGGCCGTT TCCAGTCGCA GAACTACGCG
AAGGCGCTCG CTCAATGGGA GCGAGAGCAG CGTGCCTACA GGACGGAACG CGGCGCCGCG
AGCCCGAAGG AGGAGCGCAA CTTCTCACCG GTGACGAGCT TCACGCCGCC GCCGATCGGC
CGGCGCCAGG CCGCGCCAAC CGATCCGCGC AACTACTCGC CAGTGCCGCC GGTTGCCGCC
AGCGAGGCGG AAACCACGAT GCAGCGGATT CGCCGGGCTG TCGCCAGCGA GAGCGCCAAG
GCCGTCGCGG ATTCTCAATC CGCAACCGAG CGAATCCGCG CTATGTGGAA TTTCCAGGTC
TCGCCGCAGA TTTCGCCTCG CTTTGGCGCA GCTCCAGGCG GAAGCGGCCA GTCGCCGCGC
GACCCCGCCC CTGCAACTGC CGCCCCTGCC GCCCCGAGCA AGCGAGCCGA TGCCGGCGCG
CGCGTCCAGA TTGTCAACCA CTTCACCATC AACAACACCG GCGCGAATGG AGAGCGTATC
GGCCGAGATA TCGCCCGCCA GCTTGCCCAG CTCGGCGACA GCTCCTCCGC ACTGTTCGAC
ACGGTGTAG
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| Protein sequence | MSNLDVALRL RLINQLGGPA KDAKRELESV GAAAKKLDGA KADKIARDLA RTKAEAKGAD
AALQKAAAGA KRLDGTSADR LSAKLRKATA HSDQLAQSLR RVRSEANSAD HAGKVDPVFL
QRQGRGGSAV IAGGTARMMG AVGGAYAGVR AVGAIKQSFE DFAALDRRLT RLGITAEATK
AQVDGATVKV REIAQQYAVP VEEVLKGLEA LVTQGKELPE ALAMMDAVVK SAQASGAAAE
DMSNSAGAMM TNLKLKVEEL PEAFDRLAYA GKKGQFELKD MARYFPELAA AWANVGQKGA
DKLADLAAAT QIIRKEAGTS EKTFNGIRDL LAKINSTDVQ NNFKKMGVDL EAGLKKGAKE
GKPLLDVITE LTEKALKGDM AKLPQLFGEI DSRTAISALI NLKAEFRSLR AEIQTKALGT
INADVVRLTG DARASIDKLA NAWSAAGTAV GKFVAEATPA VGILEKLSRG IDSAREYMSG
DKKDDPKKDA PRVDEPAGPK SQFSGRMQSY EHARATRAAL NARRPKLSDF SGRFQSQNYA
KALAQWEREQ RAYRTERGAA SPKEERNFSP VTSFTPPPIG RRQAAPTDPR NYSPVPPVAA
SEAETTMQRI RRAVASESAK AVADSQSATE RIRAMWNFQV SPQISPRFGA APGGSGQSPR
DPAPATAAPA APSKRADAGA RVQIVNHFTI NNTGANGERI GRDIARQLAQ LGDSSSALFD
TV
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