| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Avi_2337 |
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| Symbol | |
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| ID | 7386404 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Agrobacterium vitis S4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011989 |
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| Strand | + |
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| Start bp | 1914789 |
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| End bp | 1916588 |
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| Gene Length | 1800 bp |
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| Protein Length | 599 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 643651486 |
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| Product | Phage tail tape measure protein |
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| Protein accession | YP_002549675 |
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| Protein GI | 222148718 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01760] phage tail tape measure protein, TP901 family, core region |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCGGC TGAAGCGAGC CGAGCGCGAT TACATGTTGG CTGACAAGGG TCTTCGGCTG
TCTAATAAAG ACAAGGCAAT GGAACGCTTG CTAACGGAAC GCCATATGGC TTCCGAAAAG
AGAATGGCAA GAATGGCCAT GATGGGCCGG ACAGTCAGCG CTGTTGCTTT GGTGGCGGGT
GCGGCCGCGA CGAAATCTTA TCTGGATTTC GCCTCCAGCG AAGACAAGGT GAACCGTATC
CTGATCAATG CCAACAAGGG ATTCGGTGAT CTGTCGCCGG CGATGCGGGA TGTGCAGCGG
GTGGCAAACC AGACAGCATT GAGCGTCGGG AATGTTACCG GCGGTCTGGA AAGCCTTGTG
TCGGCTGGCC AGCCAATGGA AAAGGCGCTG GCCTTCCTGC CATCCGTTGC AAGGACAGCC
CAAGCATCAA ACTCCGCTGT GAGCGATATT GCAAATACCG CCGATGCCAT GTCGAATTCG
TTTGGTATCA GCGCGGGGCA AATGGAGAAG GCTTTCGATA TTCTGGTTGA GGGCGGTAAT
GCCGGGAAAT TCGAGCTGAA GGATATGTCG CAATACCTGC CAAAGCTGCT GCCAGCGTTC
GCGACGATTG GTTACAAGGG TGAAGAGGGC TTGGCCAAAG TTGTCGCCAT GCTCCAGATG
GTTCGGCAAC AGACGGGAAG CAGTGAGCAG GCTGCAACGG CATTGGGCAA TGTCGTTCAG
AAAATGTATT CCAATGAAAC GGCGAATAAG TTCAAGAGAT TCGGCATTGA CCTTCCAAAG
TCTTTGGACA AGGCCAAGAA GGAAGGCAAG GATGTGATGG ATACCCTTGT CGATATGTCC
ATCATTGCGA CCAAGGGCGA TCTTTCGAAG CTCCCATTGA TATTCGAAGA CACTCAGGCG
CAGGATGGTA TGCGTGCATT GATCCAGTTG CGCATGGGAA CCAAGCAGTT GACGACGGCA
CTTTATGGTG CGTCTGGCGC CGTTGAGCGA GGCTTGAACC AGGCGCTCCA AGCCAGTCAG
CAGAAGATCC AGAAGATGTC AAATCTCTGG GATGCATTGA TGACCAAGGT GGGCGGCGGC
GTGGCGACGG TCGTGAACCC AGCTCTGGAA AAGATCACCA ACACATTGGA TGAAAGGGCG
GATGAAGCGG CTGGGGTGCA GGGGCAGTCC CTTAGCTACA ATGATTTGCA GCAGCGGCAA
TTGGAGTTCT TCAAGCAGTA TGGCGAGAAA AACCCCGGCG CGTCGGTCAT GGATAAAAAC
ACAGCCTTCC GCAAGGCTCT TGCCCAGATG GGGCGCGGCG AAATCAAGGA TGTGATGGAT
TTCTTCAACC CGCCAGCCAG CAAGGAACCG CAGGTTTGGG GGCCTTCGGG CCGTGGCACC
CCGCAGCCGT GGGAGAAAGT TCCGATACCA GCGGAAAACC CGAGATCAGA TGCCTATAAC
CGCCGTATGT ATGGTGAGGG CCAATTGGCG GCACAAAGGG CAATGCGGGA TGCTGTGCCT
TCCATGCCGA CTGAATTCAG GGATGCTCAG GATGCGCTGA ATGCATCGCT GACGGGCACG
AATGGATCGC CCAACATCGG CGCCGTGCTG TCTGACAAAA TCGCCGAGGG TGGCGACAAG
GCTGCTACGG CAATGCAAAG TCAGGCGAAC ACCATCGGAT CGGCTATCGG GGCGGCTTTT
CTTTCGAAGG TATCCGGCGC ACTGGGTTCA TTCATGGCCA ATCCGGGCGG TGGGCAGCCA
CGCAGCACGG GGCAGGCGGT GCAGCAGCAG TCTAACGGGC AGTTTATCGA TGCGCCATAG
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| Protein sequence | MNRLKRAERD YMLADKGLRL SNKDKAMERL LTERHMASEK RMARMAMMGR TVSAVALVAG
AAATKSYLDF ASSEDKVNRI LINANKGFGD LSPAMRDVQR VANQTALSVG NVTGGLESLV
SAGQPMEKAL AFLPSVARTA QASNSAVSDI ANTADAMSNS FGISAGQMEK AFDILVEGGN
AGKFELKDMS QYLPKLLPAF ATIGYKGEEG LAKVVAMLQM VRQQTGSSEQ AATALGNVVQ
KMYSNETANK FKRFGIDLPK SLDKAKKEGK DVMDTLVDMS IIATKGDLSK LPLIFEDTQA
QDGMRALIQL RMGTKQLTTA LYGASGAVER GLNQALQASQ QKIQKMSNLW DALMTKVGGG
VATVVNPALE KITNTLDERA DEAAGVQGQS LSYNDLQQRQ LEFFKQYGEK NPGASVMDKN
TAFRKALAQM GRGEIKDVMD FFNPPASKEP QVWGPSGRGT PQPWEKVPIP AENPRSDAYN
RRMYGEGQLA AQRAMRDAVP SMPTEFRDAQ DALNASLTGT NGSPNIGAVL SDKIAEGGDK
AATAMQSQAN TIGSAIGAAF LSKVSGALGS FMANPGGGQP RSTGQAVQQQ SNGQFIDAP
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